| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0086 |
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| Symbol | |
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| ID | 7971621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 83932 |
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| End bp | 84804 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644790688 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002942015 |
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| Protein GI | 239813105 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATTTCG GCACCTTCCT TGTCCAGTGC CTGAACTCGG TTCAGTACGG ACTTCTTCTG
TTCCTGGTGG CCTCGGGGCT CACGCTGATC TTCGGGATCA TGGGCGTGAT CAACCTTGCG
CACGGCAGCT TCTACATGAT CGGCGCGTAC ATGGCGTTCG CGCTCTCGCC GCTGTTCGGC
GACCAGTTCT TGCTGATGCT GGTGGCCGGC GTGGTGCTGG CGGCGATCTT CGGCTACCTG
CTCGAATGGG CCTTCTTCAG CTACCTCTAC CAGCGCGACC ACCTGCAGCA GGTGCTGATG
ACCTACGGGC TCATCCTGGT GTTCGAGGAG CTGCGCTCGA TTCTCGTGGG CAACGACGTG
CACGGCGTGA AGGTGCCGGC CTGGCTCGAC GGCAGCTTCG CGCTCGGCAA CGTCATGAGC
TATCCGTGGT ACCGGCTCTT CGCTTCGGCC GCCTGCATCG TGCTGGCGGT GGCGCTGTAC
TGGGTGGTCA ACCGCACGCG GCTGGGCATG ATGATCCGCG CCGGCGCGAG CAACCGCGAC
ATGGTGCGGG GCCTGGGCAT CGACGTGAAG AGGCTCTACC GCATCGTGTT CGCGGCCGGC
GTGGCGCTCG CGGCGCTGGC CGGGATGATC GCGGCGCCGA TGTCCTCGGT CTATCCCAAC
ATGGGTGCGA GCGTGCTCAT CATCTGCTTC GTGCTGGTGG TGATCGGCGG CATCGGCTCG
ATCACGGGCG CGCTCGTGGC CTCGCTGCTG GTGGGCTTCG TCGACACCTT CGGCAAGGTG
TTCTTCGCGG ACCTGAGCGG CATCGGCATC TACCTCCTGA TGGCCATCGT GCTGATCTGG
AGGCCCGAAG GGCTGATGGG GAGGCGGCCA TGA
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| Protein sequence | MDFGTFLVQC LNSVQYGLLL FLVASGLTLI FGIMGVINLA HGSFYMIGAY MAFALSPLFG
DQFLLMLVAG VVLAAIFGYL LEWAFFSYLY QRDHLQQVLM TYGLILVFEE LRSILVGNDV
HGVKVPAWLD GSFALGNVMS YPWYRLFASA ACIVLAVALY WVVNRTRLGM MIRAGASNRD
MVRGLGIDVK RLYRIVFAAG VALAALAGMI AAPMSSVYPN MGASVLIICF VLVVIGGIGS
ITGALVASLL VGFVDTFGKV FFADLSGIGI YLLMAIVLIW RPEGLMGRRP
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