| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0084 |
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| Symbol | |
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| ID | 7971619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 82075 |
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| End bp | 82821 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790686 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942013 |
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| Protein GI | 239813103 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC TGCTTTCCGT CGAAGGCCTC ACCCGCCGCT TCGGCGGCCT CACAGCCGTC
AATGCCATCA CGCTCGACCT GCACGTCGGC GAAGTCCATG CGGTGATCGG CACCAACGGC
GCGGGCAAGT CGACGCTCAT CAACATGCTC TCGGGCGAGA TCGAAGCCTC CGAAGGCCGC
ATCGCGCTCG ACGGCGTCGA CATCACGCGG CGCGCGCAGT GGCGCCGCGC GCGCGCGGGC
GTGGGCCGCA GCTACCAGCG CACCACCATC TTCCCGGAGT TCAGCGTGCA CGAGAACTGC
CGCCTCGCGG CGCAGGCCGC CACGGCGCGG CCCTGGACGG TGTGGCAGTC GTCCGGGCGC
TGCGCGGCCA GCAATGCGGC GGCCGACGCG GCGCTCGAGG CCGCGGGCCT GTCGAACGAA
GCGCTGCGCA TCGCCGGCAC GCTGAGCCAC GGCGCGCAGC GCCAGCTCGA AGTGGCGATG
TGCCTTGCCA CCAGGCCCCG CGTGCTGCTG CTCGACGAGC CGCTCGCGGG CATGGGCGCC
GAGGAAACCG ACCGCATGCT CACGCTGCTC GCGCGGCTGA AGGCCACGCA CGCGATCCTG
CTGGTGGAGC ACGACATGGA TGCGGTGTTC CGCATTGCCG ACCGCATCAC GGTGATGGTG
AACGGCACGG TCATCGCGAC CGGCGACCCT CGGTCGATCC GAGAGAACCC CGAAGTGCGT
ACCGCCTACC TCGGAGAAGA CCACTGA
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| Protein sequence | MTALLSVEGL TRRFGGLTAV NAITLDLHVG EVHAVIGTNG AGKSTLINML SGEIEASEGR
IALDGVDITR RAQWRRARAG VGRSYQRTTI FPEFSVHENC RLAAQAATAR PWTVWQSSGR
CAASNAAADA ALEAAGLSNE ALRIAGTLSH GAQRQLEVAM CLATRPRVLL LDEPLAGMGA
EETDRMLTLL ARLKATHAIL LVEHDMDAVF RIADRITVMV NGTVIATGDP RSIRENPEVR
TAYLGEDH
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