| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0080 |
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| Symbol | |
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| ID | 7974038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 77523 |
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| End bp | 78434 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790682 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942009 |
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| Protein GI | 239813099 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGGC AATTCGGCGA CATCCTCCTG GGCAGCATCG AGTTGTTCTG CCTTGCTGCG
GAGACCGGCG GCTTCACCTC GGCCGCACTT GCTGCCGGTG TGACGCCGGC GGCCGTGAGC
CGCTCGATCT CTCGGCTCGA GAAGCGGCTG GGTTTGCGGC TTTTCGTGCG CACCACGCGC
AGCGTGCGGC TCACCGACGC GGGCCGCTCC TACTTTGCGC AGTGCCGCCA GGCGCTGGCG
CAGCTTGCCG AGGCCGAGCG CGAGGTGATG GGCCAGCAGG CGCTGCCTTC GGGCATGCTG
CGCATCAGCG TGCCGACCAC CTACGGCCAC CACCGCATCC TGCCCTTGCT GCCGGCGTTT
CGCGAACGCT TTCCCGACAT CCGGCTGCAC GTGCACCTGA GCAACCGCAA CATCGATTTC
GTGGAAGAGG GCTACGACAT GGCCGTGCGC GTGCGGGCCC AGCCCGATTC CACGCTGATC
GCGCGGCACC TCGAGGATGC GGATCTTGTC GTGGTCGCCA CGCGCAAATA CCTGAGGAGG
GCCGGCACGC CGCGCACGCT GGACGATCTT GCGGCGCACG AGTGCATCCA GTTCGAGCTG
CCCAGCAGCG GCCGCCGCAT TTCGTGGCTC TTCAAGGAGA ACGGCAAGGA CCGCGAAGTC
TTCGCAGACG GCGCCTACAG CTGCTCCGAC GACGTCCTTG GCGGCGTCAC GCTCGCGAAA
AGCAGCGCCG GGTTGTTCCA GACCTACCGC TTCGTCGTGG AGAAGGAACT GGCCGACGGC
TCGCTCGTCG AGGTGCTCAA ACCCTTCGCG GGCTGTTCGC GGCCCTACAC GCTGCTGTAC
CCAGACGGAC GCCACGTGCC GCTGCGCATG CGGGTGTTCA TCGACTTCCT GATGGCGCAG
CGCGGCGCGT GA
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| Protein sequence | MQRQFGDILL GSIELFCLAA ETGGFTSAAL AAGVTPAAVS RSISRLEKRL GLRLFVRTTR
SVRLTDAGRS YFAQCRQALA QLAEAEREVM GQQALPSGML RISVPTTYGH HRILPLLPAF
RERFPDIRLH VHLSNRNIDF VEEGYDMAVR VRAQPDSTLI ARHLEDADLV VVATRKYLRR
AGTPRTLDDL AAHECIQFEL PSSGRRISWL FKENGKDREV FADGAYSCSD DVLGGVTLAK
SSAGLFQTYR FVVEKELADG SLVEVLKPFA GCSRPYTLLY PDGRHVPLRM RVFIDFLMAQ
RGA
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