| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0078 |
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| Symbol | |
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| ID | 7974036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 76439 |
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| End bp | 76660 |
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| Gene Length | 222 bp |
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| Protein Length | 73 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644790680 |
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| Product | 4-oxalocrotonate tautomerase family enzyme |
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| Protein accession | YP_002942007 |
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| Protein GI | 239813097 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog |
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| TIGRFAM ID | [TIGR00013] 4-oxalocrotonate tautomerase family enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.678819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTTTCG TCAATCTGAA GATCACGCGC GACGGTGTCA CGCGCGAACA GAAAACCCAG
GTCATCGCCG AGTTCACGGA AACGCTCGAA CGGGTGCTGA AGAAGCCGCC GGAATGGACG
CACATCGTGA TCGAGGAGAT CGACACCGAC GACTGGGGCT TCGCGGGCCT GACCACCACC
GAATACCGCA AGCGGCTGGC CGACCGTGCG AAACCGGCGT GA
|
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| Protein sequence | MPFVNLKITR DGVTREQKTQ VIAEFTETLE RVLKKPPEWT HIVIEEIDTD DWGFAGLTTT
EYRKRLADRA KPA
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