| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0070 |
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| Symbol | |
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| ID | 7974028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 65388 |
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| End bp | 66728 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644790672 |
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| Product | hypothetical protein |
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| Protein accession | YP_002941999 |
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| Protein GI | 239813089 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCC CCCTTCGCCG TTGGCTCATC GGCATTGCCG CGGTCCTGCT GCTGGGCACC
GGCGCGCTGC TGTGGGTGGC GAGCACCCAC CTGCCCAGCG ACGAGGAAGT GGCCGCGCGC
ATCGCCGAGG GTTTCGAGAA GCGCTTCGGC GTCGGCCTGA AGATCGGCGG CGCGCACTGG
GCGCTGTGGC CCAGCCCCGT GCTGGTGCTG TCCGACCTGG CCACCGAGCA GCCGCGCCCT
GTCACGCTGC GCCGCATCAC GGTCCAGCTC AAGCTCAGGG AGCTGCTGCG GCGGGTCGTC
GCCATCGACG AGGTCGAGAT CGAGAGCCTG GTGCTGCCGC GCGAGTCGGT GCGCGCAATC
CGCGGCGGCA GCCCCAAGCC GAAGGAGGAT GGGCGCATCG TCGCGCTGCC CGCGCCCTGG
ACGCTGGCGC CGGTTCCGCT CGAAAAGCTG CGCTGGCGCG ACCTGGTCTG GATCGACCGG
CGCAACATGG CGCTGGCCTA CGACGGCGAA ATCACTTTCG ACGCCGGCTG GCGCCCGCGC
CAGGCGCGCA TCGAGCGCGC CGGCGCCTCG CCGCCCGCCC GGCTGCGCCT GGACCGCGCC
GCCGGCCAGG ACCGGTGGCG CACCCGCATC GACATTGGCG GCGGCACGGC GAACGGCGTG
GCCTGGTTCG AGACCCTGCC GCCGAACGAC CTGCTGCGCG TGTCGGCCGA ACTCGAGCCG
CGGCAGGTGG ACATCGAGGG CATGCTGCAG GCCTTCGGCC GGCGCAGCGC CGTGGCCGGC
AAGGCCTCGG GCCAATCGAT GCTGGTGGCC GAGGCCGAAG AGGTAGGTGC GCTCTTGCGC
AGCCTGCGCA CCCGCACCAC CTTCTCGGTC CAGCCCGCCA CGCTCACGCG GCTGGACCTG
GCCAAGGCCG TGACCACCGC CGGCATCAGC CGCGGCGGCA CCACGCCGCT GGACGAGCTC
ACCGGCGTGC TCGACACGCA GGGCACCGAT GACGGGGTCG TGATGCGCTA CACCGGGCTC
AAGGCGCGCT CGGGCGTGCT CACCGCGAGC GGCCGCCTGC GGCTCTTCAA CCGCAAGCTG
GACGGCGAGA TCGCGGTCGA CCTCATCGAC GGCGTGGTGG GCATGCCGCT CAAGATCGGC
GGGACCATGA GCGAGCCGGA GGTCTCGCTG ACTGGCGGCG CGCTGGCCGG CGCGGCGGTC
GGCACCGCGG TGCTGCCGGG CGTGGGCACG GCCCTCGGCG CGCGCGCGGG GCAGCAGTTG
GAAAAGCTCT TCGGCGCGGA AGAGCCGGTG AAGAAGAAGC CGGCGCCGGC AGCTCGCAAG
GGGGCGCGGG CTTCGCCTTG A
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| Protein sequence | MKRPLRRWLI GIAAVLLLGT GALLWVASTH LPSDEEVAAR IAEGFEKRFG VGLKIGGAHW
ALWPSPVLVL SDLATEQPRP VTLRRITVQL KLRELLRRVV AIDEVEIESL VLPRESVRAI
RGGSPKPKED GRIVALPAPW TLAPVPLEKL RWRDLVWIDR RNMALAYDGE ITFDAGWRPR
QARIERAGAS PPARLRLDRA AGQDRWRTRI DIGGGTANGV AWFETLPPND LLRVSAELEP
RQVDIEGMLQ AFGRRSAVAG KASGQSMLVA EAEEVGALLR SLRTRTTFSV QPATLTRLDL
AKAVTTAGIS RGGTTPLDEL TGVLDTQGTD DGVVMRYTGL KARSGVLTAS GRLRLFNRKL
DGEIAVDLID GVVGMPLKIG GTMSEPEVSL TGGALAGAAV GTAVLPGVGT ALGARAGQQL
EKLFGAEEPV KKKPAPAARK GARASP
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