| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0061 |
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| Symbol | |
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| ID | 7974019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 58525 |
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| End bp | 59469 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790663 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002941990 |
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| Protein GI | 239813080 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCC AACAACTGCG CTCGGTACGC GAGGCCGTTC GTTGCGGCTT CAACCTGACC
GAAGTCGCCC ATACCCTCCA CACGTCCCAG CCGGGCGTGA GCCGGCAGAT CCGCGAGCTG
GAGGAAGAGC TCGGCATCGA GCTCTTCGTG CGCGCCGGCA AGCGCCTCAC CGGACTCACC
GAGCCGGGCG GCCACGTGCT GCCGATCATC GAGCGCATGC TGCTGGAAAG CAGCAACCTG
CGCCATGCCG GGCAGGAGTT CGTCGCGCAG CAAAGCGGCC TGCTCTCGGT GGCGGCCACG
CATTCGCAGG CGCGCTATGC GATGCCGGTG GCGGTGCAGG AATTCCGCGC GCAGTTTCCC
AACGTGAAGC TGCACCTGCA CCAGGGCTCG CCCAAGCAGA TCGCGCAGAT GCTGATCGAC
GGCGAGGCCG ACGTGGGCAT TGCCACGGAG GCGCTGGGCG ACTATCCCCA GCTGGTGGCC
CTGCCCTGCT ACCGCTGGAC GCATTCGGTG ATCGTGCCGC CGGGCCATGC GCTGCTCGAT
GCGCCGCTGA CGCTCGAGGC GCTCACGCGC CATCCGCTGA TCACCTACGA CACCGGCTTC
ACCGGGCGCT CGCGCATCGA CGAGGCCTTT GCACAGCGCG GGCTCGCGCC CAACATCGTG
CTGGCCGCGA TGGACGCCGA CGTGATCAAG ACCTACGTGC AGCTGGGCAT GGGCGTGGGC
ATCGTGGCCG GCGTGGCCTA CGAGACGGAG CGCGACACGC AGCTGCGCGC GCTCGATGCG
GGCCGGCTCT TCGGCATCAA CATGACCAAG CTCGCGGTGC GGCGCGGCAA CTACCTGCGC
AAGTACGTCT ACGCCTTCAT CGAATCGTTC GCACCCACGC TCACGCGCGC GGTCGTCGAA
AAGGCTCTGG GCGATGAAGC GAAGGGATCG CACTACGAAA TCTAG
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| Protein sequence | MNFQQLRSVR EAVRCGFNLT EVAHTLHTSQ PGVSRQIREL EEELGIELFV RAGKRLTGLT
EPGGHVLPII ERMLLESSNL RHAGQEFVAQ QSGLLSVAAT HSQARYAMPV AVQEFRAQFP
NVKLHLHQGS PKQIAQMLID GEADVGIATE ALGDYPQLVA LPCYRWTHSV IVPPGHALLD
APLTLEALTR HPLITYDTGF TGRSRIDEAF AQRGLAPNIV LAAMDADVIK TYVQLGMGVG
IVAGVAYETE RDTQLRALDA GRLFGINMTK LAVRRGNYLR KYVYAFIESF APTLTRAVVE
KALGDEAKGS HYEI
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