| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0050 |
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| Symbol | |
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| ID | 7974008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 50782 |
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| End bp | 51729 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790652 |
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| Product | parB-like partition protein |
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| Protein accession | YP_002941979 |
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| Protein GI | 239813069 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.99928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACCA AGAAACCCAA GGGCCTGGGG CGCGGCCTCG AAGCGCTGCT CGGCCCCACG
GCCGCGCCGT CCGCCGACTC CAGCGGCACC GACGAAGGCG CCGCTGCGCA AAATCCGAAC
ACGCTGATGC TCGACGAGAT GGTGGCCGGC GTCTACCAGC CGCGCACCCG CATGGACGAA
GGCGCGCTCT ACGAGCTGGC CGAGAGCATC AAGGCGCAGG GCATCATGCA GCCGATCCTG
GTGCGCCGGC TCGATGCCGA ATCGGCTGCC GCCAAGAACG CCGAATACGA AATCATCGCG
GGCGAGCGCC GCTTCCGCGC CGCCCGGCTC GCGGGCCTCG ACCGCGTGCC GGTGCTGGTG
CGCGACGTGC CCAACGAGGC CGCGGCGGCC ATGTCGCTGA TCGAGAACAT CCAGCGCGAA
GACCTCAATC CGCTCGAAGA AGCCCAAGGC CTGCAACGCC TGGTCTCAGA GTTTGGGCTC
ACTCACGAAG CGGCTGCACA GGCCGTGGGC CGGTCGCGCA GCGCGGCCAG CAACCTGCTG
CGGCTGCTGA ACCTGGCCGA GCCGGCGCAG CAGATGCTGA TGGCCGGCGA CATCGACATG
GGCCATGCCC GCGCGCTGCT CTCGCTGGAC CGCGGCACGC AGATCACGGC CGCCAACCAG
ATCGCGGCCA AGAAGATGTC GGTGCGCGAA GCCGAGGCGC TGGTCAAAAG GCTGGCGGCC
GAGTTCACCC TCACGCCGTC CCGCCGCAGC AACGACGGCG AGAAGTCGCG CGACCTGCAG
CGCGTGGAAG AGGAACTGGC CGACCTGCTG ACCGCCGAGG TCGAGGTCCG CATCAAGAAG
CGCAGCAAGC GCGGCGGCAA GGTGGAGGAG AGCGGCGAGC TGGCGATCCA CTTCGGCTCG
ATCGAGGCGC TCAACGGGCT GATCGAGCGC ATCCGCCGAA CGGCCTAG
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| Protein sequence | MATKKPKGLG RGLEALLGPT AAPSADSSGT DEGAAAQNPN TLMLDEMVAG VYQPRTRMDE
GALYELAESI KAQGIMQPIL VRRLDAESAA AKNAEYEIIA GERRFRAARL AGLDRVPVLV
RDVPNEAAAA MSLIENIQRE DLNPLEEAQG LQRLVSEFGL THEAAAQAVG RSRSAASNLL
RLLNLAEPAQ QMLMAGDIDM GHARALLSLD RGTQITAANQ IAAKKMSVRE AEALVKRLAA
EFTLTPSRRS NDGEKSRDLQ RVEEELADLL TAEVEVRIKK RSKRGGKVEE SGELAIHFGS
IEALNGLIER IRRTA
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