| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0045 |
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| Symbol | |
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| ID | 7974003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 45983 |
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| End bp | 47941 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644790647 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_002941974 |
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| Protein GI | 239813064 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTACC CCGAAGAATT CGATGTGATC GTCGTCGGCG GTGGCCATGC CGGCACCGAA
GCCGCGCTGG CCGCTGCGCG CATGGGCGCC AAGACGCTGC TGCTCTCCCA CAACATCGAG
ACGCTGGGGC AGATGAGCTG CAACCCGTCG ATCGGCGGCA TCGGCAAGGG CCACCTCGTG
AAAGAGGTGG ATGCGCTGGG CGGCGCCATG GCCATTGCCA CCGACGAGGC GGGCATCCAG
TTTCGCATTC TCAATTCGAG CAAGGGCCCG GCGGTGCGCG CGACCCGCGC GCAGGCCGAC
CGTGTGCTGT ACAAGGCCGC GATCCGCCAT CGCCTGGAGA ACCAGCCGAA CCTGAGCCTG
TTCCAGCAGG CCGTCGATGA CCTGATGGTG GAGGGCGACC GCGTGGTCGG CGCCGTCACG
CAGGTGGGCA TTGCCTTTCG TGCGCGCACG GTGGTGCTCA CCGCCGGGAC TTTTCTCGAC
GGCCGCATCC ATGTGGGCCT GGACAACTAC CAGGCCGGCC GCGCGGGCGA TCCGCCGGCG
GTCAGCCTGT CGGCCCGGCT CAAGGAGCTC AAGCTGCCGC AGGGCCGGCT GAAGACCGGC
ACGCCGCCGC GGCTGGACGG CCGGAGCATC GACTTTTCGA AGTGCACCGA GCAAGCCGGC
GACGGCATGC CGGGCGGGGC AGGGCCGATG CCGGTGTTCA GCTTCATGGG CCGGGCCGAC
ATGCATCCGC AGCAGATGCC GTGCTGGATC ACCCACACCA ATGCGCGCAC CCACGACATC
ATCCGCTCGG GCTTCGACCG CAGCCCGATG TTCACCGGCA AGATCGACGG CGTCGGTCCG
CGCTACTGCC CGAGCGTCGA AGACAAGATC AACCGCTTTG CCGACAAGGA AAGCCACCAG
ATCTTTCTCG AGCCCGAAGG CCTGACGACC AACGAGTACT ACCCCAACGG CATCTCGACC
AGCCTGCCGT TCGACATCCA GTACCAACTC GTGCGCTCGA TGCCGGGCCT GGAGAACGCC
CACATTCTTC GGCCCGGCTA CGCGATCGAG TACGACTACT TCGATCCGCG CGAACTCAAG
AGCAGCTTCG AGACGCGTTC GATCAAGGGC CTGTTCTTTG CCGGGCAGAT CAACGGCACC
ACCGGCTACG AAGAGGCGGC GGCCCAGGGC CTGTTTGCCG GCATCAATGC GGCGCTGCAG
TGCCGCGGCG AGGAGGCCTG GTTGCCGCGC CGCGACGAGG CCTACCTGGG CGTGCTGGTC
GACGACCTGA TCACCAAGGG CGTGACCGAG CCGTACCGCA TGTTCACGAG CCGCGCCGAG
TTCCGGCTGC AGCTGCGCGA GGACAACGCC GACATGCGCT TGACCGAAGC AGGGCGCAAG
CTGGGCTTGG TGGACGATGC GCGCTGGGAT GCTTTCAGCC GTAAGCGCGA CACTGTTTCA
CGTGAAACAG AACGGCTCAA GTCGATCTGG GTGAATCCGC GCAACCTGCC CGCTGCCGAA
TCGGAGCGCG TGCTCGGCAA GGCCATCGAG CACGAATACA ACCTGGCCGA CCTGCTGCGC
CGGCCCGATG TGAACTACGA GACGCTGATG TCGCTGGACG GAGGAAAGTA CAGCGCAGGG
TCGCCGCTCA GTGAAATCGA GATCGAGCAG ATCGAGATCT CGGCCAAGTA CTCTGGCTAC
ATCGAGCGCC AGCACGACGA AGTAGAACGC GCTGCGCATT TCGAGAACCT GCGCCTGCCG
GCCGACTTCG ACTACAGCCA GGTCAAGGCG CTGAGTTTCG AGGTTCGCCA GAAGCTCGAC
AAGCACCGGC CTGAAACCCT GGGCCTGGCG TCGCGCATTT CGGGTGTCAC GCCCGCCGCA
ATTTCCCTGT TGATGATCCA TTTGCGAAAA GGTGGCCACA AGGCATTCAA CCGCGACGCC
GCCACGGAAG CCGCCGCAGA ATCGCAGCCC GCCCAATGA
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| Protein sequence | MLYPEEFDVI VVGGGHAGTE AALAAARMGA KTLLLSHNIE TLGQMSCNPS IGGIGKGHLV
KEVDALGGAM AIATDEAGIQ FRILNSSKGP AVRATRAQAD RVLYKAAIRH RLENQPNLSL
FQQAVDDLMV EGDRVVGAVT QVGIAFRART VVLTAGTFLD GRIHVGLDNY QAGRAGDPPA
VSLSARLKEL KLPQGRLKTG TPPRLDGRSI DFSKCTEQAG DGMPGGAGPM PVFSFMGRAD
MHPQQMPCWI THTNARTHDI IRSGFDRSPM FTGKIDGVGP RYCPSVEDKI NRFADKESHQ
IFLEPEGLTT NEYYPNGIST SLPFDIQYQL VRSMPGLENA HILRPGYAIE YDYFDPRELK
SSFETRSIKG LFFAGQINGT TGYEEAAAQG LFAGINAALQ CRGEEAWLPR RDEAYLGVLV
DDLITKGVTE PYRMFTSRAE FRLQLREDNA DMRLTEAGRK LGLVDDARWD AFSRKRDTVS
RETERLKSIW VNPRNLPAAE SERVLGKAIE HEYNLADLLR RPDVNYETLM SLDGGKYSAG
SPLSEIEIEQ IEISAKYSGY IERQHDEVER AAHFENLRLP ADFDYSQVKA LSFEVRQKLD
KHRPETLGLA SRISGVTPAA ISLLMIHLRK GGHKAFNRDA ATEAAAESQP AQ
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