| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0037 |
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| Symbol | |
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| ID | 7973995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 38774 |
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| End bp | 40186 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790639 |
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| Product | histidine kinase |
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| Protein accession | YP_002941966 |
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| Protein GI | 239813056 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.365028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCGCA CGCAGCCGGC CGCGCCCGGG CCATCGAAGG CAGCGCCTTC GCTCACGCGG
CGCGTGCTGC GCAACGTGCT GGTGCCGCTG GCGCTCACGT GGATGGTGGG CGCGGTGATC
GCGCTGGTCA TCGCCAACTA TTTTTCCGAG CAGGCCTTCG ACCGCGCGAT GCTCGACGAC
GCCTATGCGC TTTCGGCCAA CGTGCAGGCG GGCGAGCGCG GCATCGAGCT GCTGCTTACG
CCGCGCGAAG TGGCCACGGT GCTGTTCGAC CAGGTCGACA AGATCTACTT CGCGGTGCAG
CGGCTCGACG GCACGCTGAT CTCGGGACAG CCGGGCCTGA CTGCGCCGCT GCCCACGGGC
GATGCGCGCT ACCGCTTCTC GGACGTCAAC TTCGATGGCA AGGTCCTGCG CGCGGTGGTG
CTCGAGCCGG TTGCCGAGGC GGGCACTCTG ATGCCCTACC GGGTGGTGAT TGCCCAGACC
ACGCTGAGCC GCGCGGCGCT GGTGCAGCGG CTGCTCGGCT ATGCGCTGGC GCCGCAGGTG
CTGCTGCTGG TTCTGCTCGC GGTATGGCTC TGGCATGGCA TTCGCAGCGA CCTGCGTCCG
CTCGGCGAAC TCCAGCAGGC GCTGGACCGG CGCGATGTGT ACGACCTCTC CCCGGTCGCG
GTGGTGCGCA CCTCGCGCGA GGTGCAGCGC CTGGGCGATG CCGTCAATGC GCTGTTCGAC
CGGCTGAACC ACAGCGTGCG TGCGCAGCGC GAGTTCGTGG GCAACGTCGC GCATGAGCTG
CGCACGCCGC TCGCGGGCAT TCGCGCACTG GCCGAATACG GGCTCGCGCA GCACGACTCC
ACCGTGTGGC GCGAGCAGCT CGCGCGCGTG GCCGAGCGGC AGGCGCGCGC GAGCCACCTG
ATCGACCAGC TGCTGGCGCT CGCGCTCGCG GATGAAGCGC GCACCGGCCT CGCGCGCGAG
CCGGTGCGGC TCGACATGCT GGCCGAGCAG ACGGTGCTGC GGCACCTGGC CCGCGCCGAC
GCGCACGGCG TCGACCTGGG CGCGCGCGGC CTCGACGAGC GCGTGACGGT GCTGGCCAAC
GAAGCGCTGG TCGAGGGCAT TCTCGACAAC CTGATCGACA ACGCGCTGCG CTACGGCGGA
CGCACCATCA CCGTCGAGCT GGCGGGCCGC ACCCTGAGCG TGATCGACGA CGGCCCCGGC
ATTCCGCTGG AAGCGCAGCG CGACCTGATG CAGCGCTGGT CGCAGGGCCC GGCGGGCCAG
AAGCTCGGGC AGGGCTCGGG CCTGGGCCTG TCGATCGTCG CGCGCTATGC GGAGCTGCTG
GGCGCCGAGC TGCGGCTCGA TGCGGCCGAG CCCACGGGGC TGCGCGTGAG CATCAGCTTC
GCGGAACTGC GCCTGGCGGC GGCCGGCGAT TAA
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| Protein sequence | MSRTQPAAPG PSKAAPSLTR RVLRNVLVPL ALTWMVGAVI ALVIANYFSE QAFDRAMLDD
AYALSANVQA GERGIELLLT PREVATVLFD QVDKIYFAVQ RLDGTLISGQ PGLTAPLPTG
DARYRFSDVN FDGKVLRAVV LEPVAEAGTL MPYRVVIAQT TLSRAALVQR LLGYALAPQV
LLLVLLAVWL WHGIRSDLRP LGELQQALDR RDVYDLSPVA VVRTSREVQR LGDAVNALFD
RLNHSVRAQR EFVGNVAHEL RTPLAGIRAL AEYGLAQHDS TVWREQLARV AERQARASHL
IDQLLALALA DEARTGLARE PVRLDMLAEQ TVLRHLARAD AHGVDLGARG LDERVTVLAN
EALVEGILDN LIDNALRYGG RTITVELAGR TLSVIDDGPG IPLEAQRDLM QRWSQGPAGQ
KLGQGSGLGL SIVARYAELL GAELRLDAAE PTGLRVSISF AELRLAAAGD
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