| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0036 |
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| Symbol | |
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| ID | 7973994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 38088 |
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| End bp | 38777 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790638 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002941965 |
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| Protein GI | 239813055 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.796207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATCC TGCTTGTCGA AGACGATGCC GTGCTGCGCG ACGTGATGCT GCGCAGCCTT
GCGGATGCCG GCCACCGGGT CGACGTGTCG ACCAACATCG AGGACGCCGA CCACCTCTGG
CGCGTGCAGC CCTTCGATGC GGTGCTGCTC GACCTGAACC TGCCGGCCAC GGCCAGCCCC
ACCAGCGGTC TGGCGAGCGG CCTCAATGCC CTGCGCCAGG CGCGCGCCCG CGGCGACCGC
ACGCCGGTGC TGGTGCTGAC CGCGCGCGGC CGCACCGAGG AGCGCATCGC GGGCCTCGAC
GCCGGCGCCG ACGACTACCT GGGCAAGCCC TTCGACCTGG CCGAGGTCGA GGCACGGCTG
CGCGCACTGG TGCGGCGGGC CAAGGGCACC GAGGACATCG TGCTGCTGGG CCAGCTCAAG
CTCGACCGCA AGGCGCGCCG CTTTTCCACC GCGAGCGGGC CGCTCGACCT GCCGGCGCGC
GAGTTCGAGG TGCTGTGGGA GCTGATGAGC CCGCCGGGCC GCACGGTGAG CAAGCGGGCG
CTGTCCGACA AGCTCTCCAG CTTCGACGAA TCGCTGGGCG ACAACGCGCT GGAGGCCTTC
ATCTCGCGGC TGCGCAAGAA GCTGGCCGGT TCGGGCGCGG GCATCCGCAC GCTGCGCGGC
ATCGGCTACC TGCTCGAAGC CGAAGTGTGA
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| Protein sequence | MRILLVEDDA VLRDVMLRSL ADAGHRVDVS TNIEDADHLW RVQPFDAVLL DLNLPATASP
TSGLASGLNA LRQARARGDR TPVLVLTARG RTEERIAGLD AGADDYLGKP FDLAEVEARL
RALVRRAKGT EDIVLLGQLK LDRKARRFST ASGPLDLPAR EFEVLWELMS PPGRTVSKRA
LSDKLSSFDE SLGDNALEAF ISRLRKKLAG SGAGIRTLRG IGYLLEAEV
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