Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0028 |
Symbol | |
ID | 7973986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 31014 |
End bp | 31973 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644790630 |
Product | hypothetical protein |
Protein accession | YP_002941957 |
Protein GI | 239813047 |
COG category | [S] Function unknown |
COG ID | [COG3597] Uncharacterized protein/domain associated with GTPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACACCTT CCGAAACCCG GGCCATCGTG TCCCTCAGCC TGCTGGCCGC CTTTGTCGAC GGCGAGAAGC ACGAGCGCGA ACGCGCCGAG ATCAAGCGCA TTGCCGAAGG TCTTTCGCAA GCCGACGGCA TGAACCTGCC CACGCTCTAC CAGGACGTGC TGATGAAGCG CGTCTCGCTG GCCTCGGTCG CGGGCGAGCT CAAGAGCACG GAATCGAAGC AGCTGGCCTA CGAGATGGCG GTGTGCGTGT GCGATGCGGA TGGCACGCAG TCCGATGCCG AGCGCATGTT CCTGGCGGAC GTGCGCAGCT CGCTCGGGCT CGATGCCTCG GCGGCGCAGT TCTCGCAGCA GGCGGAAGAG ATTGCCGCGG CGGTGCCGGC GGCGGCCGCC GGTACGGCCA CGGCCGTGGC GCCCGCCGCT GTTGCTGCTG CTGCGCCATC GCCCGACAGC GCGGAGCTCG ACAAGTCGAT CCTCAACGCC TCCATCCTCA ACGGCGCGCT CGAACTGCTG CCCGAGACGC TCTCGACCAT GGCGATCATT CCGCTGCAGA TGAAGCTGGT CTACCGCATC GGCAAGGCCT ACGGCTACGA GCTCGACAGC GGCCATGTGA AGGATTTTCT GGCGACGGTC GGCGTGGGCC TGACTTCGCA GTACCTGGAG CAGGCCGGGC GCAAGCTGCT TGGCGGCCTG CTCGGCAAGA TGGGTGGCGG TTTGTTGCGC GGCCTCGGCA ACCAGGCGGT GAGCTCGGGC ATGAGCTTCG CCTCGACCTA TGCGCTCGGG CACGTGGCCA AGCGCTACTA CGCCGGCGGC CGCACGCTCT CGGCGCAGAT GCTCAAGGAA ACTTTCTCGG GCGTGGTGCA GGAAGGCAAG AGCCTGCAGA CCCAGTACCT GCCGGCGATC CAGGAAAAGG CCCGCACCCT CGACGCCGGA AAAGTGCTGT CGCTCGTCAG GGGAGCGTGA
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Protein sequence | MTPSETRAIV SLSLLAAFVD GEKHERERAE IKRIAEGLSQ ADGMNLPTLY QDVLMKRVSL ASVAGELKST ESKQLAYEMA VCVCDADGTQ SDAERMFLAD VRSSLGLDAS AAQFSQQAEE IAAAVPAAAA GTATAVAPAA VAAAAPSPDS AELDKSILNA SILNGALELL PETLSTMAII PLQMKLVYRI GKAYGYELDS GHVKDFLATV GVGLTSQYLE QAGRKLLGGL LGKMGGGLLR GLGNQAVSSG MSFASTYALG HVAKRYYAGG RTLSAQMLKE TFSGVVQEGK SLQTQYLPAI QEKARTLDAG KVLSLVRGA
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