Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0026 |
Symbol | |
ID | 7973984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 28221 |
End bp | 29663 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644790628 |
Product | sensory histidine kinase CreC |
Protein accession | YP_002941955 |
Protein GI | 239813045 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTCGGC GCACGCGGAT TTTTATCGGC ATCCTGCTGA TCTACACGGC GGGCATCGCC TTCCTGCTCT ACCGCGTGGT GTCGGACATC GATCCGCGCT ACCGCGAATC GGCCGAGGAA TCGCTGGTCG AGACTTCGCA GCTCGTGGCC AGCCTGGTCG AGCAGGACGT GATCGCGGGC GCCCTCAACA CCGCGCGGCT GGAGCCGCTG TTCCGCACGG TCTATGCGCG CGAGTTCTCC GCGCAGATCT ACAACCTGCA CAAGAACCGC GTCGAGCTGC GCGTGTACGT CACCGACCGC AGCGGCCGCG TGGTGTTCGA TTCGCTCGGC CGGCACCTGG GCACCGACTA TTCGCAGTGG AGCGACGTGA GCCGCACGCT CGCCGGCCTG TACGGTGCGC GCACCTCGCG CGACGTCGAC GGCGACCCGC GCACTTCGGT GATGTACGTG GGCGCGCCGA TCCGGTGGAA CAACGAGATC GTCGGCATGG TCAGCGTCGG CAAGCCGGTG CAGAGCTTCG GCCAGTTCGT GGAGGACGCG CGCGCCCGCA CGCTGTGGGT GGGCGTGGGA TCGGGGCTGG CGCTGCTGCT GCTGGCGGTG ATCGTCTCGG TCTGGCTGGT GCGGCCTTTC GGGCTGATCT CGGACTACTG GGCCTGGGTG CGCGCGCAGC GCACGCTGAG CCTTTCGCGC ATGGCGCGGC GCGCGGTCGA TGCGGTGCGC ACCGGCTTCA GCGAAATGCG CGATGCGCTG ACCGGCCGCA ACTACGTGGC CGACTACGTG CAGACCTTCA CGCACGAAGT GAAGAGCCCG CTCTCGGCGA TCCGCGGCGC GGCCGAGCTG CTGCAGGAGC CGTCGATGCC GCATGCCGAG CGCGAGCGCT TCCTGAAGAA CATCGAACGC GAAACGCAGC GCATCCAGGA AATCGTCGAC CGCATGATGG AGCTCACCGC GCTGGAAACC CGCCACGGGC TGGACCGCAC GGAGCCGGTG GCGCTGGCTT CGCTGATCGA GGACATCGCG ATCAGCGCGC AGCCCGCGGC GGCCAAGCGC AACATCGGCG TGCGCGTGAA CATCCGCGCC GAGGCGCGCG CGGAGGGCGA CCCCTTCCTG CTGCGGCGCG CCATCAGCAA CCTGCTGGAC AACGCGATCG ATTTTTCACC GCAGGGCAGC GAGGTGCTGC TGACGCTGGA GACCACCTCG AAGCTCGCGC GCGTGAGCGT GCGCGACCAT GGCCCGGGCA TTCCGGACTA CGCACAGGAA AAGGTCTTCC AGAAGTTCTA TTCGCTCGCG CGGCCGCACA GCCAAAAGAA GAGCACCGGG CTCGGGCTGG CCTTCGTGAA GGAGATTGCC GCGCTGCACC GCGGGCGCAT CGAGCTCGGC AATGCGGCGC GCGGCGGCGC GGTGGCCACG CTCACGCTGC CGCTGCTGCC GTCACACCAC TGA
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Protein sequence | MSRRTRIFIG ILLIYTAGIA FLLYRVVSDI DPRYRESAEE SLVETSQLVA SLVEQDVIAG ALNTARLEPL FRTVYAREFS AQIYNLHKNR VELRVYVTDR SGRVVFDSLG RHLGTDYSQW SDVSRTLAGL YGARTSRDVD GDPRTSVMYV GAPIRWNNEI VGMVSVGKPV QSFGQFVEDA RARTLWVGVG SGLALLLLAV IVSVWLVRPF GLISDYWAWV RAQRTLSLSR MARRAVDAVR TGFSEMRDAL TGRNYVADYV QTFTHEVKSP LSAIRGAAEL LQEPSMPHAE RERFLKNIER ETQRIQEIVD RMMELTALET RHGLDRTEPV ALASLIEDIA ISAQPAAAKR NIGVRVNIRA EARAEGDPFL LRRAISNLLD NAIDFSPQGS EVLLTLETTS KLARVSVRDH GPGIPDYAQE KVFQKFYSLA RPHSQKKSTG LGLAFVKEIA ALHRGRIELG NAARGGAVAT LTLPLLPSHH
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