| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0015 |
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| Symbol | |
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| ID | 7973973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 14922 |
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| End bp | 15500 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790617 |
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| Product | protein of unknown function DUF1520 |
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| Protein accession | YP_002941944 |
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| Protein GI | 239813034 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0335707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTCTC TTCGCCAACG CATCGTCTGG GCCAGCCTTC TGGGCTCGGC CGCCCTCGCC
TCTTCGGGCG CCTTCGCACA ACAGGCCCCG GCGGCACCCG GCACTTCGCC TTCCACGCCC
ACGGCCGCCG TTGCGCAGGC CGAGGGCAGC GCGGCACCCA AGGCGCAGCA CAAGCGCATG
GACCCGGCCC AGCGCATGGA GCGCATGCAG GAGCACCGCA CCAAGCGGCT TGCCGCGCTG
AAGGAAAAGC TCAAGCTGAA TGCCGGACAG GAAAGCGCGT GGACCACCTT CGCAGCGGCC
AGCCAGCCGC CGGCCCGCAC GCAGCGCATG GACCGCGCGG AATTCGCCAA GCTCACCACG
CCCGAGCGCC TGGAGCGCAT GCAGGCCCGC CAGGCCGAGC GCAGCGCCAG GTTCGCCAAG
CGCACCGAAG CCACCAAGGC CTTCTATGCC GCGCTGACGC CCGAGCAGCA GAAGACCTTC
GACGCGGAGA CGGTGCATGT CGGCATGCAT GGCCACCGCG GCCACCACCG CCACGGCGGC
GCTGACGGGC AACCTTCGGC AGCACCCGCC AAGAGCTGA
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| Protein sequence | MISLRQRIVW ASLLGSAALA SSGAFAQQAP AAPGTSPSTP TAAVAQAEGS AAPKAQHKRM
DPAQRMERMQ EHRTKRLAAL KEKLKLNAGQ ESAWTTFAAA SQPPARTQRM DRAEFAKLTT
PERLERMQAR QAERSARFAK RTEATKAFYA ALTPEQQKTF DAETVHVGMH GHRGHHRHGG
ADGQPSAAPA KS
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