| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0004 |
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| Symbol | |
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| ID | 7973962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5659 |
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| End bp | 6645 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644790606 |
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| Product | hypothetical protein |
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| Protein accession | YP_002941933 |
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| Protein GI | 239813023 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGTCA CCAGCATGAA TTCCGTCGGG GCTTCGGAAA CGACGTATCG GGTGTGGACG
GACGATCCCG GCAGCTTCTC TACCCAGAGG ATCACGCCGA TGCACCACAA CTTCCACGAG
CATCCGCTAT TCCAGGTGCC CGAGCTCGTG AGGCTCGGGA TGGAACTCTC GAAGCTGGAC
CAGTGCAGGT TCATGAACCC CGACAGGACG GTCGCTTCCA GGCTCGCGCA CGACAGCCGG
CCGCCCGACG GGCGCAGCAT CGCGGAATTC TTCAAGCGCG TGGAGGAGCC AGGTTCGTCG
GTGGCCTTCT ACAACATCGA AGTCATCCCG CGCTACCAGG CCCTGCTGAT GTCGGTGGTG
AATTCGATGC GCTCCCTCGT CGAGCGCGAG CAGCCGGACA TCTTCAGGGT GAACGGATTC
GTTTTCTTCT CTGCGCCGCC TTCCGTCACG CCCTTTCACA TCGATCGCGA GAACAACTTC
TGGCTGCAGT TGCATGGCCA CAAGATCCTC AACGTCTGGG ACCACCGCGA CCGCAGCATC
GTGCCGGCGG AAGCGGTGGA GGATTTCATC GTCACGCAGT CGCTCCAGAA AGTGCGCTTC
AACCAAGCGT TCTTGCCGCG CGGGCTGGAA TTCGATGCGC AGCCCGGCGA TGCCGTCTAT
TTCCCGAGCA CCTCGCCCCA CATGACGAGA TCCACGGCCG ACCGGGCCGC CACCCCTGGC
GGTCGCCTGT CGATCTCGAT CGGCGTGACC TTCTACACCG CTTCGACGCG CAAGGTGGCA
CGCATTCACC AAGTGAACCG GCTGATGCGC AAGTGCGGAA TGTCTCCCTC CTATCCGAGC
GAATCGCCCA CCGCAGATAC CGCCAAATCC GCCGTCGGCG GCTTGGTGGG CGCCTGCCGC
GCACGGCTCG GCGCTGCGCG GGCCCGGTTC ATCTGCATGA CCTCGGCACG GCGAGTCAAG
CACGCGCCGC CGCCGGGCTC CTACTGA
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| Protein sequence | MCVTSMNSVG ASETTYRVWT DDPGSFSTQR ITPMHHNFHE HPLFQVPELV RLGMELSKLD
QCRFMNPDRT VASRLAHDSR PPDGRSIAEF FKRVEEPGSS VAFYNIEVIP RYQALLMSVV
NSMRSLVERE QPDIFRVNGF VFFSAPPSVT PFHIDRENNF WLQLHGHKIL NVWDHRDRSI
VPAEAVEDFI VTQSLQKVRF NQAFLPRGLE FDAQPGDAVY FPSTSPHMTR STADRAATPG
GRLSISIGVT FYTASTRKVA RIHQVNRLMR KCGMSPSYPS ESPTADTAKS AVGGLVGACR
ARLGAARARF ICMTSARRVK HAPPPGSY
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