| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0003 |
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| Symbol | |
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| ID | 7973961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2747 |
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| End bp | 5371 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790605 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_002941932 |
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| Protein GI | 239813022 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.202809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAG AAGAGAACAA GCCCGAAGTA CCCCACACCG AGCCGGTCTA CACGCCCGAG
ATCGAGAGTG CGGTACCGAT CGAGATCACG CCCGCCGACA CCAGCTACGG CGAAGGCTCG
ATCACGATCC TCGAAGGGCT CGAGGCGGTG CGCAAGCGCC CCGGCATGTA CATCGGCGAC
ACCTCCGACG GCACGGGCCT GCACCACCTG GTGTTCGAGG TGGTCGACAA CTCCATCGAC
GAGGCGCTGG CCGGGCATTG CGACGACATC GTCGTGACCA TCCACACCGA CAACTCGATC
TCCGTCACCG ACAACGGCCG CGGCATTCCC ACGGGCGTGA AGATGGACGA CAAGCACGAG
CCCAAGCGCT CGGCCTCCGA AATCGCGCTC ACCGAGCTGC ACGCGGGCGG CAAGTTCAAC
CAGAACAGCT ACAAGGTGTC GGGCGGCCTG CACGGCGTGG GCGTGAGCTG CGTGAACGCG
CTGAGCGTGA TGCTGCGCCT GGTGGTGCGG CGCGAAGGCA AGATCCACGA GCTCGAATTC
AGCCGCGGCT TCGTGCAGAA CCGCCTGATC GAGACCGTGA ACGGCGTCGA GGTGTCGCCG
ATGCGGATCA TCGGGGAGAC CGACAAGCGC GGCACCGAAG TCCACTTCCT GCCCGACACC
GAGATCTTCA AGGAGAACGC CGATTTCCAC TATGAAATCC TCTCCAAGCG GTTGCGCGAG
CTGAGCTTTT TGAACAACGG CGTGCGCATC CGCCTGAAGG ACGAGCGCAG CGGCAAGGAA
GACGACTTCT CGGGCGCCGG CGGCGTCAAG GGTTTTGTCG ATTTCATCAA CAAGGGCAAG
ACCGTCCTGC ACCCCAACGT GTTCTACGCA ATGGGCGAGA AGCCGGCCGA CACCTACGGC
GGCATCCCGG GCACGCACAT CGGCGTCGAA GTGGCGATGC AGTGGAACAG CGGCTACAAC
GAGCAGGTGC TGTGCTTCAC CAACAACATC CCGCAGCGTG ACGGCGGCAC CCACCTCACG
GGCCTGCGCG CCGCGATGAC ACGCGTCATC AACAAGTACA TCGAAGAAAA CGAGTTCGCC
AAGAAGGCGA AGGTCGAAGT CACCGGTGAC GACATGCGCG AAGGCCTGTG CTGCGTGCTG
AGCGTGAAGG TGCCCGAGCC CAAGTTCTCG AGCCAGACCA AGGACAAGCT GGTGTCCAGC
GAAGTGCGCG CGCCGGTGGA AGACATCGTC GGCCGCCTCC TGACCGACTA CCTGCAGGAA
CGCCCGAACG ACGCCAAGAT CATCTGCGGC AAGATCGTCG AGGCCGCCCG CGCCCGCGAG
GCTGCGCGCA AGGCCCGCGA GATGACGCGC CGCAAGGGCG TGCTCGACGG CATGGGCCTG
CCCGGCAAGC TGGCCGACTG CCAGGAAAAG GATCCCGCGC TGTGCGAGGT CTACCTGGTG
GAGGGCGACT CCGCCGGCGG CTCCGCCAAG CAGGGCCGCG ACCGGAAGTT CCAGGCCATC
CTGCCACTGC GTGGCAAGAT CCTGAACGTG GAAAAGGCGC GCTACGAGAA GCTGCTCACC
AGCAACGAAA TCCTCACCAT GATCACGGCG CTGGGCACCG GCATCGGCCG TGCCGGCGCC
ACCAGCGCGG GCGGCGGGGC GGACGACTTC AACGTCGCCA AGCTGCGCTA CCACCGCATC
ATCATCATGA CCGACGCCGA CGTCGACGGC GCCCACATCC GCACGCTGCT GCTCACCTTC
TTCTACCGGC AGATGCCGGA GCTGGTCGAG CGCGGCCACA TCTACATCGC GCAGCCGCCG
CTGTACAAGG TGAAGGTCGG CAAGGAAGAG CAGTACCTGA AGGACGGCCC CGCGCTGGAC
GCCTTCCTGC TCAAGGTGGC GCTGAAGGAC GCGAGCATCG AGACCGGCGG CCCCAACTCG
ACCACCCTCT CCGGCGACAC GCTGGCCGAG CTCGCGCGCA AGCACCAGCT GGCCGAAGCC
GTGATCGCGC GGCTGCGCAA CTTCATGGAT GCCGAGGCCC TGCGCGCCAT TGCCGACGGC
GTGGCGCTCG ACCTCGACAC CACGCCCGCG GCCGAAGCCT CGGCCGTGGC GCTGCAGGCC
AAGCTGCGCG AGCTCAACAC CACCGGCGTG CCGGCCGAGG TAAGCAGCGA ATTCGACGCC
CGCACCGACA AGCCGCTGCT GCGCATCAGC CGCCGCCACC ACGGCAACAT CAAGAGCAGC
GTGCTCACGC AGGACTTCGT GCACGGCGCC GACTACGCCG CGCTCGCCGA AGCCGCCAAC
ACCTTCCGCA ACCTCCTGAG CAGCGAAGGC GCCACCGTCC GCCGCGGCGA AGGCGAACGC
GCCAAGGAAG AAAAGGTGGC CGACTTCCGC ATCGCCATGA AGTGGCTCAT CGGCCAGGCC
GAGAACGCCA CCTCGCGACA GCGCTACAAG GGCCTGGGCG AAATGAACCC CGCACAGCTG
TGGGAAACCA CCATGGACCC GACCGTGCGC CGCCTGCTGC GCGTGCAGAT CGACGACGCG
ATCGAAGCCG ACCGCGTGTT CACGATGCTG ATGGGCGACG AGGTCGAACC GCGCCGCGAA
TTCATCGAGC AGAACGCGCT GCGGGCGGCG AATATCGACG TCTGA
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| Protein sequence | MSAEENKPEV PHTEPVYTPE IESAVPIEIT PADTSYGEGS ITILEGLEAV RKRPGMYIGD
TSDGTGLHHL VFEVVDNSID EALAGHCDDI VVTIHTDNSI SVTDNGRGIP TGVKMDDKHE
PKRSASEIAL TELHAGGKFN QNSYKVSGGL HGVGVSCVNA LSVMLRLVVR REGKIHELEF
SRGFVQNRLI ETVNGVEVSP MRIIGETDKR GTEVHFLPDT EIFKENADFH YEILSKRLRE
LSFLNNGVRI RLKDERSGKE DDFSGAGGVK GFVDFINKGK TVLHPNVFYA MGEKPADTYG
GIPGTHIGVE VAMQWNSGYN EQVLCFTNNI PQRDGGTHLT GLRAAMTRVI NKYIEENEFA
KKAKVEVTGD DMREGLCCVL SVKVPEPKFS SQTKDKLVSS EVRAPVEDIV GRLLTDYLQE
RPNDAKIICG KIVEAARARE AARKAREMTR RKGVLDGMGL PGKLADCQEK DPALCEVYLV
EGDSAGGSAK QGRDRKFQAI LPLRGKILNV EKARYEKLLT SNEILTMITA LGTGIGRAGA
TSAGGGADDF NVAKLRYHRI IIMTDADVDG AHIRTLLLTF FYRQMPELVE RGHIYIAQPP
LYKVKVGKEE QYLKDGPALD AFLLKVALKD ASIETGGPNS TTLSGDTLAE LARKHQLAEA
VIARLRNFMD AEALRAIADG VALDLDTTPA AEASAVALQA KLRELNTTGV PAEVSSEFDA
RTDKPLLRIS RRHHGNIKSS VLTQDFVHGA DYAALAEAAN TFRNLLSSEG ATVRRGEGER
AKEEKVADFR IAMKWLIGQA ENATSRQRYK GLGEMNPAQL WETTMDPTVR RLLRVQIDDA
IEADRVFTML MGDEVEPRRE FIEQNALRAA NIDV
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