Gene Bcav_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4221 
Symbol 
ID7858575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4666274 
End bp4666798 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content69% 
IMG OID643868321 
Productsingle-stranded nucleic acid binding R3H domain protein 
Protein accessionYP_002884221 
Protein GI229822695 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.185264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA GCGAGCAGGT CGAGACGCCG TCCGCCCTCG AGGGTCCGCC GGAGACGAAG 
CGTCTCGAGG AGGAAGGCGA GATCGCCGCC GACTACCTCG AGGAGCTCCT CGACATCGCG
GACCTGGACG GTGACATCGA CATCGACGTC GAGCACGGTC GGGCTGCCGT CGAGATCGTC
GCGGAGGGTG AGGACCAGCG ATCGCTGAGC AAGCTCGTCG GTGGCGAGGG CGAGGTGCTC
GATGCGTTGC AGGAGCTGAC GCGCCTTGCC GTGCAGGCGC GCACGGGTGA GCGCAGCCGC
CTCATGCTCG ACATCGCGGG TCACCGCGCG CAGCGTCGCG CCGAGCTGAC CCAGCTCGCG
GAGTCCGCGA TCGAGGAGGC ACGCGGCACC GACGAGCCGG TCGCGCTGGA GGCGATGAAT
CCCTTCGAGC GCAAGGTCGT TCACGACGTC GTCGCGGCGG CCGGGTTGGT GAGCGACTCC
GAGGGTGTGG AGCCGAACCG CCGGGTTGTG ATCCGGGTCA GCTGA
 
Protein sequence
MTESEQVETP SALEGPPETK RLEEEGEIAA DYLEELLDIA DLDGDIDIDV EHGRAAVEIV 
AEGEDQRSLS KLVGGEGEVL DALQELTRLA VQARTGERSR LMLDIAGHRA QRRAELTQLA
ESAIEEARGT DEPVALEAMN PFERKVVHDV VAAAGLVSDS EGVEPNRRVV IRVS