| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4207 |
|---|
| Symbol | |
|---|
| ID | 7858561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4643175 |
|---|
| End bp | 4644626 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643868307 |
|---|
| Product | polynucleotide adenylyltransferase/metal dependent phosphohydrolase |
|---|
| Protein accession | YP_002884207 |
|---|
| Protein GI | 229822681 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR02692] tRNA adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACGC CCGAGGCACA GCGCCCCGCG CAGCTCATGC GGACGGCGCT CGGCGTGCTC
GCCGGCATCG CCGCCGACGT GGACCCGTTG GGCGACCTGT TCGCCGCGGG CGGCCACGAG
ATCGCGCTCG TCGGCGGCCC GGTGCGGGAC GCGTTCCTGG GCCGCGGCAG CTCCGACCTG
GACTTCGCGA CGTCGGCGCG ACCCGAGCAG ACCGAGGCGA TCCTCGCTCG GTGGGGGGAC
GCCGTCTGGG ACGTCGGCCG CGCGTTCGGG ACGATCGGCG CCGGCCGCGG GGACGTCGTC
GTCGAGGTGA CGACGTATCG CACCGAGGCG TACGACGCCG GCTCCCGCAA GCCCGCCGTC
GAGTACGGGG ACACGCTCGA CGGCGACCTG TCCCGCCGCG ACTTCACCAT CAACGCGATG
GCGGTCCGGC TGCCGGACCT CACGTTCGTC GACCCGCACC ACGGCCTCGA CGACCTCGCC
GCGCACGTGC TGCGGACCCC GGTCTCGGCG GAGCAGTCGT TCGACGACGA CCCGCTCCGG
ATGATGCGGG CCGCGAGGTT CGCCGCGCAG CTGCGGGTCG ACGTCGCCCC GGACGTCATG
GCGGCGATGA CGGCGATGGC CGGCCGGCTG GCGATCGTCT CGGCGGAGCG GGTGCAGGCG
GAGCTCACGA AGCTGCTCCT GGCGCCGGCG CCGCGGCGCG GGCTGGAGCT CATGGTCGAG
ACGGGGCTGG CCGACGTCGT GCTGCCGGAG CTCCCGGCCA TGAAGCTCGA GATCGACGAG
CACCACCGGC ACAAGGACGT CTACGAGCAC TCGCTGACGG TGCTCGATCA GGCGATCGAC
CTCGAGACGG GTCCCGACGG GCCCGTGCCG GCACCGGACC TGGTGCTGCG GCTGGCGGCA
CTGCTGCACG ACGTCGGGAA GCCCGCCACG CGTCGCAACG AGCCGGGTGG GCGGGTGAGC
TTCCATCACC ACGAGGTGGT CGGGGCGAAG CTCGCGCGCA AGCGCCTGGC GGCACTGCGC
TACGACAAGG CGACCATCGC CGACGTCACC ACCCTCATCG CGCTGCACCT GCGGTTCCAC
GGGTACGGCG ACGGCGCCTG GACCGACTCG GCGGTGCGCC GCTACGTGAC CGACGCCGGG
CCGGAGCTGG AGCGGCTGCA CCGCCTCACC CGCGCGGACT GCACCACGCG CAACCGGCGC
AAGGCGGAGC GGCTGTCGCA CGCGTACGAC GACCTGGAGC GCCGCATCGC AGAGCTGGCG
GAGAAGGAGG AGCTTGCGGC GATCCGCCCG GACCTCGACG GCGCGGCGAT CATGGCCACG
CTCGGGATCG GGCCGGGCCC GGTGGTCGGC GAGGCGTACC GGTTCCTGCT GGAGCTCCGG
ATGGAACGGG GGCCCGTGGA GCCGGACGTG GCGCGCGCGG AGCTGCTCGC CTGGTGGGCC
GCACGCGAGT AG
|
|---|
| Protein sequence | MPTPEAQRPA QLMRTALGVL AGIAADVDPL GDLFAAGGHE IALVGGPVRD AFLGRGSSDL
DFATSARPEQ TEAILARWGD AVWDVGRAFG TIGAGRGDVV VEVTTYRTEA YDAGSRKPAV
EYGDTLDGDL SRRDFTINAM AVRLPDLTFV DPHHGLDDLA AHVLRTPVSA EQSFDDDPLR
MMRAARFAAQ LRVDVAPDVM AAMTAMAGRL AIVSAERVQA ELTKLLLAPA PRRGLELMVE
TGLADVVLPE LPAMKLEIDE HHRHKDVYEH SLTVLDQAID LETGPDGPVP APDLVLRLAA
LLHDVGKPAT RRNEPGGRVS FHHHEVVGAK LARKRLAALR YDKATIADVT TLIALHLRFH
GYGDGAWTDS AVRRYVTDAG PELERLHRLT RADCTTRNRR KAERLSHAYD DLERRIAELA
EKEELAAIRP DLDGAAIMAT LGIGPGPVVG EAYRFLLELR MERGPVEPDV ARAELLAWWA
ARE
|
|---|
| |