Gene Bcav_4173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4173 
Symbol 
ID7858101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4600456 
End bp4601298 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content71% 
IMG OID643868273 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002884173 
Protein GI229822647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC GCGCAGGGCT GGCGGAGTTC CTCCGCGGCC GCCGGGGGGT GCTGCAGCCG 
GAGGACGTCG GACTCCCGCG TGGGCAACGT CGTCGGACCC GCGGGTTGCG GCGGGAGGAG
GTCGCGCTGC TGTGCCACAT GTCGACCGAC TACTACTCGC GGCTGGAACG GGAGCGCGGC
CCGCAGCCGT CGGAGCAGAT GATCGCGTCG ATCGCGCAGG GGCTGCACCT CTCCCGCGAC
GAGCATGACC ACCTCTTCCG CCTCGCCGGA CACCAGGCCC CAGCCCGAAA CTCGGGGAGT
CACCACGTGA GCCCCGGGAT GCTGCGGATC TTCGACCGGC TCGCCGACAC CCCGGCCGAG
ATCGTCACCG AGCTCGGCGA GACGCTCCGG CAGACGCCGC TCGGCGTCGC GCTCGTCGGT
GACCTGACCC GGTTCACCGG GCCGGCGCGG AGCATCGGAT ACCGCTGGTT CACGGACCCG
ACCGTTCGGG ACCTCTACCC GGCCGAGGAT CACGCGTTCT ATACGCGGAT GTACGCCTCA
GGGCTCCGCG GTGTGCTCGC CCTGCGCGGG CCGGACTCCA GGGCCGCGCA CCTCGCGGAG
CTGCTCACGG CCCAGAGCGA GGAGTTCCGC ATCGTGTGGA AGAAGCACGA GGTCGGCATC
ACGCCGAACG AGGTGAAGCG GTTCCAGCAC CCCACCGTCG GGCTGCTCGA GGTGAGCTGC
CAGATCCTCC ACGACCCGGA GCAGTCCCAC TCCCTCCTCG TCTACACGGC CACGCCGGGG
AGCGAGAGCT ACGAGAAGCT CCAGCTCCTC TCGGTGGTGG GGGCGACGCC GTCGTCGGCC
TGA
 
Protein sequence
MIDRAGLAEF LRGRRGVLQP EDVGLPRGQR RRTRGLRREE VALLCHMSTD YYSRLERERG 
PQPSEQMIAS IAQGLHLSRD EHDHLFRLAG HQAPARNSGS HHVSPGMLRI FDRLADTPAE
IVTELGETLR QTPLGVALVG DLTRFTGPAR SIGYRWFTDP TVRDLYPAED HAFYTRMYAS
GLRGVLALRG PDSRAAHLAE LLTAQSEEFR IVWKKHEVGI TPNEVKRFQH PTVGLLEVSC
QILHDPEQSH SLLVYTATPG SESYEKLQLL SVVGATPSSA