Gene Bcav_4171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4171 
Symbol 
ID7858099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4598013 
End bp4599326 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content73% 
IMG OID643868271 
ProducttRNA synthetase class II (D K and N) 
Protein accessionYP_002884171 
Protein GI229822645 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCAC CCGTATCCCC GAGCCGGCGC ACGCTCGCCG CCGAGCTGGC CGCAGCCTCG 
CCCGGCGGCG TCGTGACGCT CCGAGGGCAC GTCCACCGAC GGCGGGAGCT CGCCCGCGTG
ACGTTCCTGG TCGTCCGCGA CCGGTCCGGC CTCGCCCAGG TGGTCATCCG TCCCGACGAC
GGCGTCCCGG CGGTTCCGCC GGAGGAGACA CCGGTGGAGG TGACGGGGGT GGCGACGGCG
AACGCGCAGG CTCCGGGCGG CGTCGAGATC ACGACGCCGA CCATCACCGC GCTGAGCGAC
GCCGCGGCCA CGCCGCCCGT GGAGCTGTGG CGGCCGAAGC TCGACGCGTC GCTGCCCGTG
CTGCTCGAGA ACGCGGCGGT GGCGTGGCGG CACCCGGTGA TGCGCGCTCG GTGGGAGATC
GCGGCGGCGT CCCTGAAGGG CTTCCGGTCG TACCTCGACG CGCGCGCCTT CACGGAGGTC
CGCAGCCCCA AGCTCGTCGC CACGGCCACG GAGTCCGGGG CGAACGTGTT CGGCGTCGAC
TACTTCGGCC GCCCCGCGTA CCTCGCGCAG AGCCCGCAGT TCTACAAGCA GCAGCTCGTG
GGCGTGTTCG AGAGGGTGTA CGAGGTCGGA CCGGTGTTCC GGGCCGAGCC GCACGACACC
GTGCGGCATC TTGCGGAGTA CACGTCGCTC GACGTCGAGC TCGGCTTCAT CGAGGGTCAC
CGTGACGTCC TGGCGGTGCT GCGCGGGGCG CTCGCCAGCA TGGTCGACGC CGTACGGAGT
ACGGCTTCCG ACGCCGTCGA GCTCCTCGGC CTCACGCTCC CCGCCATCCC CGCCGAGGTG
CCGGTCATCC ACTTCGCCGA GGCGCTGGCG CGCGTGGGCG CGGCACCGGA CGAGCCCGAC
CTCGCGCCCG AGCACGAGCG GGCACTGGGC GAGTGGGCGC GCGACGAGCT CGGCAGCGAC
GTCCTCGCCG TCGAGGGCTA CCCGATGCGC AAGCGGCCCT TCTACACACA TCCCTGGACG
GGGGCCGAGC CTGGTGGCCC CTGGAGCAAC AGCTTCGACC TCATCTTCCG GGGCGTCGAG
CTGGTGACCG GGGGACAGCG GCTGCACCGC CACGCGGACT ACCTGACGGC GATCCGAGCG
CGCGGGGAGG AGCCGTCCGA GTACCGGCAC TACCTCTCCG CGTTCGAGCA CGGCATGCCG
CCGCACGGCG GCTTCGCGAT CGGGCTCGAG CGGTGGGTCT CGCGGTTGGT CGGTGCGGCC
AACGTCCGGG AGGTCACGCT CTTCCCGCGT GACCTGCACC GGCTGACGCC GTGA
 
Protein sequence
MRPPVSPSRR TLAAELAAAS PGGVVTLRGH VHRRRELARV TFLVVRDRSG LAQVVIRPDD 
GVPAVPPEET PVEVTGVATA NAQAPGGVEI TTPTITALSD AAATPPVELW RPKLDASLPV
LLENAAVAWR HPVMRARWEI AAASLKGFRS YLDARAFTEV RSPKLVATAT ESGANVFGVD
YFGRPAYLAQ SPQFYKQQLV GVFERVYEVG PVFRAEPHDT VRHLAEYTSL DVELGFIEGH
RDVLAVLRGA LASMVDAVRS TASDAVELLG LTLPAIPAEV PVIHFAEALA RVGAAPDEPD
LAPEHERALG EWARDELGSD VLAVEGYPMR KRPFYTHPWT GAEPGGPWSN SFDLIFRGVE
LVTGGQRLHR HADYLTAIRA RGEEPSEYRH YLSAFEHGMP PHGGFAIGLE RWVSRLVGAA
NVREVTLFPR DLHRLTP