Gene Bcav_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4157 
Symbol 
ID7858085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4586704 
End bp4588695 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content76% 
IMG OID643868258 
Producthistidine kinase 
Protein accessionYP_002884158 
Protein GI229822632 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.921776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA CGCCGCCGGC GCGCTACCCC GGCCGGCCGC GCGCCGCCGT CGCCGTCGTC 
GTGGCCGCCG CGCTCCCGGC GATCGCGGGC GCGGTGCTGC TCGTCGCGAG CGGTGCGCCG
ATCACGCCCG ACGTGCTGTT CCTCGTGGTC GACGTCACGG TGGGGCTCGT CTACGGCACG
GTTGCGGCCG TCATCCTGTC CCGGCGCAGC CACGCGGTCG CCTGGCTGCT GGCGCTCGCC
GCCGTCGGTG GGGGTCTGTC CGCGCTGGGC GGCGGCTGGA TGACGTACGC CGTCGAGCAC
CCGGCGGTCC CCGGATTCGA CCTTGCCGCG ACGATCTTCG GCTCAGCCTG GGTGCCGGGC
ACGCTCGCGC TGTTCCTCGT GGTGCCCTGG TTGGTCCGCG AGGAGCCGTT GGACCGCTGG
TCCTGGGCGG GCGTCGCGAT CGGCGCGCTC ACCACGCTCG CGTTCACCGT GCAGCGGCTG
GCGTTCCCGG CCTCCGACAA CGCGTGGCTC CTCGTCGCCG TCGTGGTCGT CGGGCTCGGC
ACGGCCGCGG CCGTGGCGTG GCGACGCCGG CACGGCCCTC CGCGCGAGCG AGCCGGCCTC
GGGCTCCTCG CGGCGGGCAC CGCGGTGATG GCGCTCTCGT TCTTGCCGCT GCTGCTGGTG
CCCTACACGA GCGCGGAGGT GCTGCTGCTC GTGCCGGCCT CCCACCTCGC GTGCCAGGCG
CTCTTCCCCG GCGCGCTCCT GGTGACGATG CTGCGGAACC GGCTGTGGGG CATCGATCTG
GCCGTGAGCC GGGCCGTGCT GGCCGGACTG CTCGCCCTCG GCCTGGCGAT CGTCTACGCC
GGGCTGGTGT GGACGGCGTC GGCTCTCGTC GACAGCTCGA CGGTCGCGCA GGTCGTCGCG
GCCGTCGGGG TCGCGGTGGC CGTCCAACCC GTGCGACGGC GTCTGGATGA CCGGGTGCGC
CGCCTGGTCT GGGGTGAGGC GGCCTCGCCG GGTCGCGCCG CGCTGCGCAT CGGCGCCTCC
CTCTCGGCGG GCTCCGGTTC CGCCGAGCTG CTCGACCGCC TCGCCGCCGC GGTGGGAGAG
GCGCTGCTCC TGGAGTCGGT CACGCTCACG ACGTCCGACG ACGACGGGGT CGGACGGTGG
GGCGACCCGA CGAGCGTCGT CGTCGAGCGC CCGATCGACC GGGAGGGCGC CACCGTCGGC
ACGATCGCCG TGACGCCGCG GCCCGGTGAG CAGCTCGACC GGCGCACGCT CGACGCGCTC
GACCGTCTCC AGCCGGTGCT CGCCGTCGGG CTCGGGCTCG TCCGCGCGAC CGCCGACGTG
GTACGGGCCC GCGACGCTGC CACCCGGGCT CGGCTCGCCG AGCGCAAGCT CATCCGGCGC
GAGCTGCACG ACGGGATCGG ACCGTGGCTG TCTGGTCTCC GGCTCGGCCT GCAGGGCGCT
CGCAACGTGC TGCGCAGCGA CCCCGACGCC GCGGACTCCG TGCTCGCCGC GCTGCAGGAG
GAGGTCGGGC AGCGGGTGGA GGACGTGCGC CTGCTGTCGC GCAGCCTCCT GCCGCCGGTC
CTCGAGGAGC GCGGGCTCGC CGCGGCGCTG GCGGAGCTGG TGGCGCGCTA CGCCGAGACG
GGGTTCGCCG TCGTCGGCGC TCCGACCGAG GACGTGACCG ACCCCCTGCG CTCGCTGGAC
CCCCGCATCG CCGCCGCCGC GTACGCCGTC GTCTCCGAGT CGGTGCTGAA CGCGTCCCGG
CACTCCGGTG CGCGCCGCTG CACCATCGAC GTCGCTCTCG CCGACGACGC CGATGGTCCG
GCGCTCGTCG TCACGTGCCT CGACGAGGGG ATGGGCCGGG CGCGGGAGGC GGGCGACGGC
GTCGGGTCCC GATCGATGCG GGAGCGCGCC GAGGAGCTGG GTGGATCAGT GGTCATGGGT
CCCGGGCCGG ACGGCGTGGG CACGCTCGTG CGGGCACGGT TGCCGCTGGC GCCGACGGCG
GTGCCGGCGT GA
 
Protein sequence
MSTTPPARYP GRPRAAVAVV VAAALPAIAG AVLLVASGAP ITPDVLFLVV DVTVGLVYGT 
VAAVILSRRS HAVAWLLALA AVGGGLSALG GGWMTYAVEH PAVPGFDLAA TIFGSAWVPG
TLALFLVVPW LVREEPLDRW SWAGVAIGAL TTLAFTVQRL AFPASDNAWL LVAVVVVGLG
TAAAVAWRRR HGPPRERAGL GLLAAGTAVM ALSFLPLLLV PYTSAEVLLL VPASHLACQA
LFPGALLVTM LRNRLWGIDL AVSRAVLAGL LALGLAIVYA GLVWTASALV DSSTVAQVVA
AVGVAVAVQP VRRRLDDRVR RLVWGEAASP GRAALRIGAS LSAGSGSAEL LDRLAAAVGE
ALLLESVTLT TSDDDGVGRW GDPTSVVVER PIDREGATVG TIAVTPRPGE QLDRRTLDAL
DRLQPVLAVG LGLVRATADV VRARDAATRA RLAERKLIRR ELHDGIGPWL SGLRLGLQGA
RNVLRSDPDA ADSVLAALQE EVGQRVEDVR LLSRSLLPPV LEERGLAAAL AELVARYAET
GFAVVGAPTE DVTDPLRSLD PRIAAAAYAV VSESVLNASR HSGARRCTID VALADDADGP
ALVVTCLDEG MGRAREAGDG VGSRSMRERA EELGGSVVMG PGPDGVGTLV RARLPLAPTA
VPA