Gene Bcav_4141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4141 
Symbol 
ID7858069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4572336 
End bp4573796 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content71% 
IMG OID643868243 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002884143 
Protein GI229822617 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC ACGCAGGTGG CTCTGGAGCT GGGCGCTGGG GAGTGCTGTG GGCGGTGGCC 
GCGGCGCAGC TGCTCGTGGT GCTGGACGGC ACGATCGTCA ACATCGCCTT GCCGTCGGCG
GATGCGCAGC TCGGGCTGGG AGAGGACACG CGCCACTGGG TCATCAGCGC CTACCTGCTG
GCTTTCGGCG GGTTGCTGCT GATCGGTGGC CGGGTCAGCG GGGCGATCGG TCATCGACGG
GCGTTCGTGA TCGGTCTGCT GGGCTTCGCG GTGGCCTCGT TCCTCGCGGG GCTCGCCTGG
AACCCGGCGG CACTGATCGG CGCCCGCGCG CTCCAGGGGG TTTTCGCGGC TCTGCTGGCG
CCGGCGGCAC TGTCGGTGCT GTCGCTGTCG TTCCCGGACC CCCGTGAGCG TGGCCGCGCG
TTCGGGGTGT TCGCCGCGGT CGGCGCGACG GGGTCGGCGA TCGGCCTGGT CCTCGGTGGC
CTGCTCACTG AGTTCGCGAG CTGGCGGTGG TGCCTGTACA TCAACGTCCC GATCGCCGTC
GGAGCCGCCG TCGGCGCCGT CCTGATCCCG AGGCTCGCCC CGGTGCCGCG CACCGGGCGC
GTCGACGTCC TCGGTGGCGT CCTCAGTGCT GCCGGGATCG CGGCCATCGT CCTGGGTATC
AGCCGGATCG AGACCAGGGC CGGAGTGTCG CCGCTCGTGC TCGGCCTGCT GGTCGGCGGG
ATCGTCCTGC TGACAGCGTT CGTGCTCGTC GAGCGACGCG CCGCCCAGCC CGTTCTCCCG
CTCAGCGTGC TGACGGATCG GGCCCGAGCG GGATCCTTCA TCGCGATCGC TCTGATGTTC
CTCGCGATGT TCGGCTTCTA CCTGTTCATG AGCTACTACA CGCAGTCCCA GCTCAGCTAC
TCCCCGATCG GGGCGGGCGG CGTCCTGCTC ATCCACGCTC TCGTCGCCCT GGTGGGGTCC
GTCTGGATCG CAGGCAAGCT CATGGGTCGC GTCCCTGCGC GCGTTCTCGT CGTCAGCGGA
CTGCTCGCGG CGGCCGCCGG GCTGCTCGTC CTGACCTTCC TCGAGGCGGA CTCCTCCCAC
GTGTTCGCCG TCTACCTGCT GCCCGCGATG GTGCTCACCG GGCTCGGCAT GGGCTTGGTG
ATCACGCCTA CGGCCAGCAC CGCCACCCAA GGAGTCAAGG GACACGATAT CGGCGCGGCG
TCGGCAACCT TCAACGCCGC GCAGCAGCTC GGCGCGGCCA TCGGGGTCGC CCTGCTGAAC
ACCGTCGCCG TCCTGTCGAG CACCAGCTAC CTGTCCGACC AGAGCGCGAC GCAGACCGAG
GCCGCGATCC ACGGCTACAC CACCGCCCTG GCGGTCGGGG CGGGCACCCT GCTCGCCGCC
GCCGTCGTCA GCGCCGTGAT GATTCGGAGC CGGCGGCCCG ACGACGTCTC CCGGACAGAG
CGTGTCCGGG TCGCGAGCTA G
 
Protein sequence
MKKHAGGSGA GRWGVLWAVA AAQLLVVLDG TIVNIALPSA DAQLGLGEDT RHWVISAYLL 
AFGGLLLIGG RVSGAIGHRR AFVIGLLGFA VASFLAGLAW NPAALIGARA LQGVFAALLA
PAALSVLSLS FPDPRERGRA FGVFAAVGAT GSAIGLVLGG LLTEFASWRW CLYINVPIAV
GAAVGAVLIP RLAPVPRTGR VDVLGGVLSA AGIAAIVLGI SRIETRAGVS PLVLGLLVGG
IVLLTAFVLV ERRAAQPVLP LSVLTDRARA GSFIAIALMF LAMFGFYLFM SYYTQSQLSY
SPIGAGGVLL IHALVALVGS VWIAGKLMGR VPARVLVVSG LLAAAAGLLV LTFLEADSSH
VFAVYLLPAM VLTGLGMGLV ITPTASTATQ GVKGHDIGAA SATFNAAQQL GAAIGVALLN
TVAVLSSTSY LSDQSATQTE AAIHGYTTAL AVGAGTLLAA AVVSAVMIRS RRPDDVSRTE
RVRVAS