Gene Bcav_4122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4122 
Symbol 
ID7861508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4555589 
End bp4555912 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content73% 
IMG OID643868224 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_002884124 
Protein GI229822598 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.847034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CCACGCAGCA GAGCGCAGCC CAGCGACTCG TCGGCGACAT CGCCCCGAAG 
CTGGCCGCCC TGACCGACGA CGTGCTGTTC GGCGAGGTGT GGTCGCGGCC GGAGCTCGCC
CGCCGCGACC GCAGCCTCGT GACCGTCGCC GCCCTCGTCA CCAACGGCAG CACCGAGCAG
CTCCGGAGCC ACCTCGCGCT GGCGCGGGAG AACGGGCTGA CTGAAGGCGA GCTCATCGAG
GCGATCACCC ACCTCGCGTT CTACGCCGGG TGGCCGCGGG CGATGTCCGC CGTCGGCGTC
GCGCGGGAGG TCTTCGCCGC CTGA
 
Protein sequence
MTDPTQQSAA QRLVGDIAPK LAALTDDVLF GEVWSRPELA RRDRSLVTVA ALVTNGSTEQ 
LRSHLALARE NGLTEGELIE AITHLAFYAG WPRAMSAVGV AREVFAA