| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4085 |
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| Symbol | |
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| ID | 7861471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4515041 |
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| End bp | 4516330 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643868188 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002884088 |
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| Protein GI | 229822562 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.535273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACT CAGCGGGTCA GCGCCGTAGC CCGGCGAGCT CGACCCCGAC CGCCGTCGCC
GCCGTGTTCC GCGAACACCA CGGGCGCGCC GTCGCCGTCC TGGTCCGCGC GTTCGGGGAC
ATCGACATCG CGGAAGACGC GGTGCAGGAG GCATTCGTCG CGGCGCTCGA GCACTGGCCG
GATGGTCCGC CGCCGAGCCC GGGCGGCTGG ATCATCACGA CCGCGCGCCG CAAGGCGATC
GACCGGCTCC GCCGCGAGGG GTCCCGCGCC GACCGGCACG CTCAGGCCGC GCTCCTCCAC
GCCGTCGAGC CACCGGCCGA GGAGGGTCCC GTGCGCGACG ACCGGCTCAG GCTCGTCTTC
ACCTGCTGCC ACCCGGCGCT CAGCCGGCAG GCGCAGGTGG CGCTCACCCT GCGTCTGCTC
GGCGGGCTGA CGACGGCGGA GATCGCCCGC GCGTTCCTCG TTCCGGAGGC GACGATGGCG
CAGCGGCTCG TGCGCGCCAA GGGGAAGATC CGGGACGCCC ACATCCCGTA CCGCGTGCCG
CGCGACGCGG ACCTCCCGGA CCGGCTCGCG GGCGTGCTCG CCGTCGTCTA CCTCGTGTTC
AACGAGGGGT ACGCCGCGAG CTCGGGCGAC GATCTCGTGC GCGACGACCT GTGTGCCGAG
GCGATCCGCC TCGGCCGGCT CCTCGCCGAG CTCATGCCGG ACGAGCCCGA GGTGCTCGGC
CTGCTCGCGC TCCTGCTCCT CAGCGAGTCG CGCCGGCCCG CCCGCACCGG CCAGGACGGC
GCGCTGGTCC TGCTGCGCGA CCAGGACCGC GATCTCTGGG ACCGCGGACT GATCGCCGAG
GGCCACGCGC TGGTCCGGCG TTGCTTGCGC CGCAACAGTC CCGGCCCGTA CCAGGTGCAG
GCAGCGATCC AGGCGGTGCA CACGGACGCG CCGTCGGCGG CCGACACCGA CTGGCGCCAG
GTCGTCGCCC TCTACGACCA GCTGCTCGCC CTCACGCCGA GCCCGGTGGT CGAGCTCAAC
CGGGCGGTCG CCGTCGCCGA GGTGGACGGG CCGACGACGG CGCTCGCGCT GGTCGAGGCG
CTCACCCTCG AGCGCTACGA CGTGTTCCAC GCGGTCCGCG GCGACCTGCT GGCACGTCTC
GGGCGCCCGG CGGGCGCCGC GGAGGCATAC GCGCGGGCAG CCGAGCTGGC CGGGAACGCG
GCCGAGCGCA CCTACCTGGA GAACGCACGG GACGCCGTCG TCGGTGAGGC CCGTCCGTCC
CGCCCACCGG GCGGTGGCGC CTACGCTTGA
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| Protein sequence | MTHSAGQRRS PASSTPTAVA AVFREHHGRA VAVLVRAFGD IDIAEDAVQE AFVAALEHWP
DGPPPSPGGW IITTARRKAI DRLRREGSRA DRHAQAALLH AVEPPAEEGP VRDDRLRLVF
TCCHPALSRQ AQVALTLRLL GGLTTAEIAR AFLVPEATMA QRLVRAKGKI RDAHIPYRVP
RDADLPDRLA GVLAVVYLVF NEGYAASSGD DLVRDDLCAE AIRLGRLLAE LMPDEPEVLG
LLALLLLSES RRPARTGQDG ALVLLRDQDR DLWDRGLIAE GHALVRRCLR RNSPGPYQVQ
AAIQAVHTDA PSAADTDWRQ VVALYDQLLA LTPSPVVELN RAVAVAEVDG PTTALALVEA
LTLERYDVFH AVRGDLLARL GRPAGAAEAY ARAAELAGNA AERTYLENAR DAVVGEARPS
RPPGGGAYA
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