Gene Bcav_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4080 
Symbol 
ID7861466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4510590 
End bp4511642 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content72% 
IMG OID643868183 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_002884083 
Protein GI229822557 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.754321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTACA CGTTCATGTA CGCCACACAC ACGAGTGTGT GCCCCACACG CGAGGAGACA 
GTGATGCAGG ATCCGATGAT CGCCATCCGG GGACTGGCGA AGTCCTACGG AAAGAACGCC
GTGCTCCGCG GCGTCGACCT CGAGGTGAAG CGCGGCGAGA TCGTCGCGCT GCTCGGCCCG
AACGGTGCCG GCAAGACGAC GGCGGTCGGC ATCCTCACCA CGCTCATCGC GCCGGACGCG
GGCACGGTGC ACCTGGGCGG GATCGACGTC GTCGCGTCGC CCCGGGCGGC ACGCACCCGG
GTCGCCGTCA CGGGCCAGTA CGCCTCGGTC GACGAGTTCC AGACCGGCGA GGAGAACCTC
CTCCAGATGG CCGCGCTCAA CGGACTGTCG AAGCGCGACG GCAAGCGCCG GACGTCGGAG
CTCCTCGAGC GCTTCGACCT CACGGCGGCG TCCCGCCGTC AGGTCGGCAC GTACTCCGGC
GGGATGCGGC GCCGGCTGGA CCTGGCGTCG AGCCTCGTCG CACGTCGACC CGTGCTGGTG
CTCGACGAGC CGACCACCGG CCTGGACCCG GCCAGCCGCA TGGACCTGTG GGACGTCGTC
GCCGACCTCG CCCGCGAAGG CACCACGATC CTCCTCACCA CGCAGTACCT CGAGGAAGCC
GACCACCTCG CCGACCGCAT CACCGTGCTC GACGGCGGCC GGATCGTCGC GGAGGGCACG
GCGGCGGCGC TCAAGGCGCG CGTCAGCCGC GAGGCTGGAG ACCAGGTCCG CCTCGTGCTC
GACGACGCAC GCAGCTTCGA CGTCGCGCGC GGCCTCGGCC TGCCGATCAG CACGGTCGAC
GAGCGCGGGC TCAGCGTGAC GGTCCGCGCC GAGAGCTCGG TCGGCACGGT CCGGGAGCTC
CTCGACCTCG CCGACGCCCA CGACCTCGCC GTCGACTCCG TCGCCATCGT GCGGCCGAGC
CTCGACGACG TCTTCCTCGC CCTCACCGGG GCACGCCGTA CCACCACGAC CACCCCGGCC
GACGAGCCAG CCACGACGGG AGCGAACCGA TGA
 
Protein sequence
MVYTFMYATH TSVCPTREET VMQDPMIAIR GLAKSYGKNA VLRGVDLEVK RGEIVALLGP 
NGAGKTTAVG ILTTLIAPDA GTVHLGGIDV VASPRAARTR VAVTGQYASV DEFQTGEENL
LQMAALNGLS KRDGKRRTSE LLERFDLTAA SRRQVGTYSG GMRRRLDLAS SLVARRPVLV
LDEPTTGLDP ASRMDLWDVV ADLAREGTTI LLTTQYLEEA DHLADRITVL DGGRIVAEGT
AAALKARVSR EAGDQVRLVL DDARSFDVAR GLGLPISTVD ERGLSVTVRA ESSVGTVREL
LDLADAHDLA VDSVAIVRPS LDDVFLALTG ARRTTTTTPA DEPATTGANR