| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4080 |
|---|
| Symbol | |
|---|
| ID | 7861466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 4510590 |
|---|
| End bp | 4511642 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643868183 |
|---|
| Product | daunorubicin resistance ABC transporter ATPase subunit |
|---|
| Protein accession | YP_002884083 |
|---|
| Protein GI | 229822557 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.754321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTACA CGTTCATGTA CGCCACACAC ACGAGTGTGT GCCCCACACG CGAGGAGACA
GTGATGCAGG ATCCGATGAT CGCCATCCGG GGACTGGCGA AGTCCTACGG AAAGAACGCC
GTGCTCCGCG GCGTCGACCT CGAGGTGAAG CGCGGCGAGA TCGTCGCGCT GCTCGGCCCG
AACGGTGCCG GCAAGACGAC GGCGGTCGGC ATCCTCACCA CGCTCATCGC GCCGGACGCG
GGCACGGTGC ACCTGGGCGG GATCGACGTC GTCGCGTCGC CCCGGGCGGC ACGCACCCGG
GTCGCCGTCA CGGGCCAGTA CGCCTCGGTC GACGAGTTCC AGACCGGCGA GGAGAACCTC
CTCCAGATGG CCGCGCTCAA CGGACTGTCG AAGCGCGACG GCAAGCGCCG GACGTCGGAG
CTCCTCGAGC GCTTCGACCT CACGGCGGCG TCCCGCCGTC AGGTCGGCAC GTACTCCGGC
GGGATGCGGC GCCGGCTGGA CCTGGCGTCG AGCCTCGTCG CACGTCGACC CGTGCTGGTG
CTCGACGAGC CGACCACCGG CCTGGACCCG GCCAGCCGCA TGGACCTGTG GGACGTCGTC
GCCGACCTCG CCCGCGAAGG CACCACGATC CTCCTCACCA CGCAGTACCT CGAGGAAGCC
GACCACCTCG CCGACCGCAT CACCGTGCTC GACGGCGGCC GGATCGTCGC GGAGGGCACG
GCGGCGGCGC TCAAGGCGCG CGTCAGCCGC GAGGCTGGAG ACCAGGTCCG CCTCGTGCTC
GACGACGCAC GCAGCTTCGA CGTCGCGCGC GGCCTCGGCC TGCCGATCAG CACGGTCGAC
GAGCGCGGGC TCAGCGTGAC GGTCCGCGCC GAGAGCTCGG TCGGCACGGT CCGGGAGCTC
CTCGACCTCG CCGACGCCCA CGACCTCGCC GTCGACTCCG TCGCCATCGT GCGGCCGAGC
CTCGACGACG TCTTCCTCGC CCTCACCGGG GCACGCCGTA CCACCACGAC CACCCCGGCC
GACGAGCCAG CCACGACGGG AGCGAACCGA TGA
|
|---|
| Protein sequence | MVYTFMYATH TSVCPTREET VMQDPMIAIR GLAKSYGKNA VLRGVDLEVK RGEIVALLGP
NGAGKTTAVG ILTTLIAPDA GTVHLGGIDV VASPRAARTR VAVTGQYASV DEFQTGEENL
LQMAALNGLS KRDGKRRTSE LLERFDLTAA SRRQVGTYSG GMRRRLDLAS SLVARRPVLV
LDEPTTGLDP ASRMDLWDVV ADLAREGTTI LLTTQYLEEA DHLADRITVL DGGRIVAEGT
AAALKARVSR EAGDQVRLVL DDARSFDVAR GLGLPISTVD ERGLSVTVRA ESSVGTVREL
LDLADAHDLA VDSVAIVRPS LDDVFLALTG ARRTTTTTPA DEPATTGANR
|
|---|
| |