Gene Bcav_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4072 
Symbol 
ID7861170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4502901 
End bp4503905 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content76% 
IMG OID643868175 
ProductPyridoxal 4-dehydrogenase 
Protein accessionYP_002884075 
Protein GI229822549 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.354561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGC AGAGGCTGCC GCGGCGCGAC GTCGCGCTGA CCGAGGTCGG GTTCGGCGCC 
GCGCAGGGCG GGGACCTGTA CCGCCCGACG ACGCACGAGG AGTTCGCCCG CGCCGTCGAG
ACCGCCTGGG ACGGCGGCGT GCGGTACTTC GACACGGCGC CGCACTACGG CCTCGGGCTG
TCCGAGCGAC GGCTCGGCGC CCTGCTGCGG GATCGACCCC GCGGGGAGCT CGTGCTGTCG
ACGAAGGTCG GGCGGCTCCT CGTTCCGTCA CCGTCGACGG CGCACGAACG CGACCTCGAC
CACGGTGGCA TGTTCGACGT GCCGGCCGAC GTCCGCCGCG TCTGGGACTT CACCGCCGAC
GGCGTGCGCC GCTCGCTCGA GGAGAGCCTG GGGCGGCTCG GACTCGACCG CGTCGACGTC
GTCTACCTGC ACGACCCCGA CGAGGCCGGC CTGCTCGACG TCGCGATCGC CGAGGCGATC
CCCGCGCTCG CCGCGCTGCG CGACGAGGGC GTGATCGGCG CGATCGGCGC CGGGATGAAC
GCGTCCGCGC CGCTGGCACG CGTGGTGCGC GAGGGCGACG TCGACGTCGT CATGTGCGCC
GGGCGCTACA CGCTGCTCGA CCCGAGCGCG GCCGACGACC TGCTGCCGCT CGCCGCCGAA
CGCGGGGTCG GCGTCGTCGT CGCCGGGGTG TACAACTCCG GGCTGCTCGC GCACGACAGG
CCGCCCGCCG ACGCCACGTA CGACTACGCG CAGGCGCCCC GCGAGCTGCT GATGCGGGCG
CACCGGATCG CCGACGTGTG CGAGGCGCAC GGGGTGACCC TCCCCGCGGC GGCCCTGGCG
TTCGTGCGCG GGCACCCGGC CGTCGTCTCG ACGGTCGTGG GGCTGCGGAC GGCTGAACAG
GTCACGCAGG CGCTCGACCG GGCGGCGACG GCGGTCCCCG CCGCACTCTG GCGCGACCTG
CGCTCCGCCG GCCTGCTCCG CGCGGACGTG CCGGCGCCCG CGTGA
 
Protein sequence
MDTQRLPRRD VALTEVGFGA AQGGDLYRPT THEEFARAVE TAWDGGVRYF DTAPHYGLGL 
SERRLGALLR DRPRGELVLS TKVGRLLVPS PSTAHERDLD HGGMFDVPAD VRRVWDFTAD
GVRRSLEESL GRLGLDRVDV VYLHDPDEAG LLDVAIAEAI PALAALRDEG VIGAIGAGMN
ASAPLARVVR EGDVDVVMCA GRYTLLDPSA ADDLLPLAAE RGVGVVVAGV YNSGLLAHDR
PPADATYDYA QAPRELLMRA HRIADVCEAH GVTLPAAALA FVRGHPAVVS TVVGLRTAEQ
VTQALDRAAT AVPAALWRDL RSAGLLRADV PAPA