Gene Bcav_4066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4066 
Symbol 
ID7861164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4498138 
End bp4499295 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content75% 
IMG OID643868169 
Productbeta-lactamase 
Protein accessionYP_002884069 
Protein GI229822543 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.43014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAG ACCGCGCCAT CGAGGACGCG CTCGCGCCGC ACGTCCAGGG AGACGACCCA 
CCGGGCCTCG CCTGGCTCGT CGCGCGCGGT GACGACGTGC GGGCGGGCTC GATCGGCACC
CACGAGCCCG TCGGCGGCGG AGGGATCGCG CGCGACACGA TCTTCCGCAT CTCGTCGGTC
ACCAAGCCGG TGTGCGCCGT CGTCGCGATG ATGCTGCTCG ACGACGGCGT GCTCAGCCTG
GACGACCCGG TCCAGGAGTG GCTGCCGGAG CTCGCCGACC GGCGCGTGCT CGCCGAGCCG
AACGGCCCGC TCACCGCGAC CGTGCCCGCG CACCGGCCGA TCACGGTGCG CGACGTGCTG
ACGTTCCGCC TCGGGACCGG CATGGACTTC ACCGGGCCGT TCCCCGGCGT CGTGCTGGAG
GCGATGACCG CGAGCGGCCT CAACGTCGGC CCGCCCGCGC CGGCCGTGAA CCCGGAACCG
GCCGAGTGGA TGCGCCGGTT CGGTGAGCTG CCGCTGATGG TCCAGCCGGG CGAGCGCTGG
CTCTACCACA CGTCCGCGGA GGTGCTCGGT GTGCTGCTGG CGCGAGCCGC CGGGGAGCCG
CTGCCGGGCC TGCTCGCGGA GCGCCTGTTC GACCCGCTCG GGATGACGAG CACCGCGTTC
GACGTCCCGC CCGAGCGCCG GGGCCGATTC GGGCCGCAGT GGGCGTCGAA CCCGGGAACC
GGCGCGCTCG AGCGGTACGA CGACGCCGAC GGCCAGTGGT CGCGCCCGCC CGCCTTCCCC
GGCGCGGGCG ACGGGCTGGT CTCGACCGTC GACGACCTGT ACGCGCTCGC GGACCTGCTG
CGCGGTGGCG GGGCGACGGC GCGCACGGGT CGGCTCGTGA GCGAGGAGTC GGTCCGGGCG
ATGACCACCG ACTACGTGGG TGGTGTCGCG GACGCCGCGG GGCTCATCGG GTGGGGCTTC
GCGACCGGCG TGCAGATCGC CGACGCACCG GGCGGCCGGC CCGCCGGCAG CTACGGCTGG
GACGGCGGCA TGGGCAGCAC CTGGTGGATC GACCCGGCGA GCGGCGTCGT CGGCATCCTG
CTCACGAACC GGGCCTGGTC GACGGCGGGG CCGTCACCGG TGTTCGACGC GTTCTGGGGC
GCCGTGCACG CCACCTGA
 
Protein sequence
MTPDRAIEDA LAPHVQGDDP PGLAWLVARG DDVRAGSIGT HEPVGGGGIA RDTIFRISSV 
TKPVCAVVAM MLLDDGVLSL DDPVQEWLPE LADRRVLAEP NGPLTATVPA HRPITVRDVL
TFRLGTGMDF TGPFPGVVLE AMTASGLNVG PPAPAVNPEP AEWMRRFGEL PLMVQPGERW
LYHTSAEVLG VLLARAAGEP LPGLLAERLF DPLGMTSTAF DVPPERRGRF GPQWASNPGT
GALERYDDAD GQWSRPPAFP GAGDGLVSTV DDLYALADLL RGGGATARTG RLVSEESVRA
MTTDYVGGVA DAAGLIGWGF ATGVQIADAP GGRPAGSYGW DGGMGSTWWI DPASGVVGIL
LTNRAWSTAG PSPVFDAFWG AVHAT