Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_4062 |
Symbol | |
ID | 7861160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4492586 |
End bp | 4495264 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643868165 |
Product | polysaccharide lyase 8 alpha-helical |
Protein accession | YP_002884065 |
Protein GI | 229822539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.505411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.685622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGAC CCCATGGAAT CAGCCGACGG AACGTCTTGA TCGGAGGGTT GGGCGCAGCG GCGGCGATCC TGGCGGCCGA CCTCACCAGC GGCCCCGCCG GCGCCGCCTG GGCCGGCCCC ACCATCGCCT CGGACCCGGC CGCATTCGCC GCCGCTCGCG AGCGGTGGCT GCGCTTCTAC CTCCCGGCGG GTCTGGACCT GGCCGATCCC CTGGTGGCGG CACCCGCTCA ACAGCTCGTC ACGACCGCGC GCACCCACCT GGCCAACATC GACCGCGCCG AACCGCGGCT CGGTGTCTTC GCCGACTCCC CCTTCACGAG CCGCTCGACG TATCAGGACT CGCAGCGGGT CTCCTACAGC ACGCGGCGAC TCCGCGAGAT GGCACAGGTG TGGGCCGCCG GCGCGCTCGA GCCCGACGAG GCCGACGCGA TGCTGACGGC AATCCAGGAG GGCCTCGACT ACCTCACCTC CGATGTCTGG TCGACCAGCG GCGTCCGGTT CGGAGACTGG TACGACTGGG ACATCGCCAT CCCGAGGTCG ATCCACGAGG CCGTCCTGTT CGTCTACGAC GCCTTGACGC CGGGGACCAC CGCCGCCGTC GTCGCGGCGA GCAAGCACTT CACCCCGACG ATCCCGACGT CGGGCACGTA CGCAGCTGCC GGCAACAGGG TCTGGTTCTG CGACGCGTTC ATGGGGCGTG GGCTGCTTGT CGACGACGAA GCCGATGTCA TTGCCGGCAG GGACGGCCTG GTGCCGGTGA TCGCGTGGGC GAACCCCGAC CCGCGGCCGC CCGGCCTCAT CGATCCTTCG ACCGAGAACG AGGCGTTCTT CAGCCACGAC GGCTTCTACC CGGACGGCTC CTTCGTCCAG CACGGCCAGT TCCCCTACAT CGGGCTCTAC GGCACCTCCT ACCTCGGCTC CATCCCCGGC ATCACCGCTC GGACGGCGGG CACGGAGTGG GAGCCCGCCA CCGACATCCT GTGGGAGTGG GTCTGGTCCG CGTACGAGCC ATGGCTGTTC CGCAGCCGGG TCCCGGACAC TGTGCGGGGT CGCCAGATCG ACCGGCCGCT CGGCAGCCGG GAGACCGGGA CCTCGTTCCT CAACGGGCTG ATCTCTCTCG TGGCCAGCGC CGACGAGACG AACCGGGCCC GGTTGGAGTC CCTGATCAAG GCCGAGCTGG CCTACCGCGG CGACCCCCCG ACCGCCGACA TGGTTCTGGC CAACGCCGCG GTGGCCTCGA GGATCCTCGC CGACCCCGAC ATCGTTCCGC GCCCGCCACT GACCGGCACC TGGGTGTTTG GCGTGATGGA CCGGGTGCTG CACCGGCGGG CGGACTGGAT CGCGGTGCTG GCGATGCACT CGTGGCGGAT GGCGAACGCG GAGAAGGGCC TGGTCGAGAA CAAACGAGGC TGGTATCAGG CCGACGCCTC GGTGCTGATG TACACGCCTG ACATCGTGCA GTACGACGAA GGTTTCTGGG CGACGATCGA CTCCTACCGC ATCCCGGGCG TCACCACCGA CACCGTGGCC CGTCAGCTGT ACCCGGGTGG CTGGGCGAAC GAGTACCACA ATCCCAGCTA CTGGGCCGGC GGCGTGACCG CCGGACAGTG GGGCGCAGCG GCGATCGACC TAGCCGGCGA ACCACCGTCC ACGATGCACG GCCGCTTCTC CCGCTTCTTC TTCGAGCACG GCTACGTCTT GTTGGGCGCC GGGATCACTG TCGACGCCGG GCGGACGGCG GAGACGACTG TGGAGAACCG ACGGGTCACG ACGGTGAGCA CCGGAACGCT CACCGTCGAC GGCGACCCGG TGGACGCGTC CGGCCAGATT GCCGGGGCGC ACTGGGCACA CCTGGCCGGC ACCGGCGGGT ACGTCATGCT CGCGCCTCAC GATCTCACCG TCGTCAAGGA GCGCCGAAGC GGCCGGCTCA TCGACATCAA CACGGGGTTG ACCAAGCCGG AGGCCTTCGT GGTGCGCGAG CACGACTACG TGACGCTCGT CCTGCCGCAC GGCTCGGCGT CGCCGTCCGC CGGCTACGCG TACGCCGTCC TGCCAGGTGC CTCAGCCGCC ACTACTGCTG CGGAGTCCAC GGCGCCGCGG TACCACGTCG TCGCACGGAC GCCGGAGGCG CAGGCAGTGC GCGACGAGCC GAGCGGGCGC GCCGGCTTCG TGTTCTTCAC GCCCGGGTCG GTGTCGCTGG TGACGACGGA CACCGGCGCC GCAGTCGCGC TCGAGGAGGG CGATGACGAG CTGACGGTGC ACGTGAGCGA TCCGACCCAG GAGTCATCGA GCATCGTGAT CGACCTCGCG GCGGAGGTCT CCGGCGCGAT CGCCCTCGAC GATGGCGTCG AGCTCTCCGT CACGGACGGC CGGGCGACCC TGACTGTCGA CGTTGCGGGT CTAACGGGCT CGACGAAGGC AGCCCGGTTG GCCTGGAACC CGCCGACCCT GCTCGACCTC GTCCGCGCGG TGGAACGAGC GGCGCGGGCC TGCGCCGCTC CTCCGGATCA GGAGCGCGAG GCTGTGCAGT CGGTACGGCA CGCTCAAGGT GGCCACCGCC CCGCCGAAGC CCTGCGGGCC CTGCGGAGGG TGCTTGACGC CTGGGCGGAG CTCCGGCCGT CGCCGGAGAT CGAGGCCGCC ATCGACCTGG CGTCGCGGCT CGTGGCCCGG GTCGAGTAG
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Protein sequence | MSGPHGISRR NVLIGGLGAA AAILAADLTS GPAGAAWAGP TIASDPAAFA AARERWLRFY LPAGLDLADP LVAAPAQQLV TTARTHLANI DRAEPRLGVF ADSPFTSRST YQDSQRVSYS TRRLREMAQV WAAGALEPDE ADAMLTAIQE GLDYLTSDVW STSGVRFGDW YDWDIAIPRS IHEAVLFVYD ALTPGTTAAV VAASKHFTPT IPTSGTYAAA GNRVWFCDAF MGRGLLVDDE ADVIAGRDGL VPVIAWANPD PRPPGLIDPS TENEAFFSHD GFYPDGSFVQ HGQFPYIGLY GTSYLGSIPG ITARTAGTEW EPATDILWEW VWSAYEPWLF RSRVPDTVRG RQIDRPLGSR ETGTSFLNGL ISLVASADET NRARLESLIK AELAYRGDPP TADMVLANAA VASRILADPD IVPRPPLTGT WVFGVMDRVL HRRADWIAVL AMHSWRMANA EKGLVENKRG WYQADASVLM YTPDIVQYDE GFWATIDSYR IPGVTTDTVA RQLYPGGWAN EYHNPSYWAG GVTAGQWGAA AIDLAGEPPS TMHGRFSRFF FEHGYVLLGA GITVDAGRTA ETTVENRRVT TVSTGTLTVD GDPVDASGQI AGAHWAHLAG TGGYVMLAPH DLTVVKERRS GRLIDINTGL TKPEAFVVRE HDYVTLVLPH GSASPSAGYA YAVLPGASAA TTAAESTAPR YHVVARTPEA QAVRDEPSGR AGFVFFTPGS VSLVTTDTGA AVALEEGDDE LTVHVSDPTQ ESSSIVIDLA AEVSGAIALD DGVELSVTDG RATLTVDVAG LTGSTKAARL AWNPPTLLDL VRAVERAARA CAAPPDQERE AVQSVRHAQG GHRPAEALRA LRRVLDAWAE LRPSPEIEAA IDLASRLVAR VE
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