| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4055 |
|---|
| Symbol | |
|---|
| ID | 7861153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4485462 |
|---|
| End bp | 4485980 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643868158 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002884058 |
|---|
| Protein GI | 229822532 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAACC CACCGTTCGC CCAGGTCGTC GAGCGGCACG GTCCCACCGT GCTGCGCGTC
GTGCGGGCGC TCCTGCCCCC GGACCAGGCG GACGACGCCT GGTCGGAGAC GTTCCTCGCC
GCCCTCAAGG CCTACCCGGA CCTCCCGGGC GGCGCCAACC TCGAGGCCTG GCTCGTCACG
ATCGCGCACC GCAAGGCGAT CGACGCGCAT CGGTCACGGG CGCGGCGGGC CGTTCCGGCG
GGCGGCGCGT CCGACGTCGT CGAGCGGCTC GACGCAGCCG GTCACGTCGG TACCGGCCAC
GTCGGCGCAC CGCCCGGAGG CTGGGAGCGG GACCTGTGGG AGGCACTTGC CGAGCTCGCA
CCGAAGCAGC GCACGTGCGT CGTCCACCAC TACGTGGGCG GGCTGCCGTA CGAGGAGGTC
GCCGCGATCG TCGGCGGCAC CGCGGCGGCC GCCCGTCGCG CAGCGGCCGA CGGCGTCGCG
CGCCTGCGCC GGACGTACCT CGAAGGAGCA GCATCATGA
|
|---|
| Protein sequence | MSNPPFAQVV ERHGPTVLRV VRALLPPDQA DDAWSETFLA ALKAYPDLPG GANLEAWLVT
IAHRKAIDAH RSRARRAVPA GGASDVVERL DAAGHVGTGH VGAPPGGWER DLWEALAELA
PKQRTCVVHH YVGGLPYEEV AAIVGGTAAA ARRAAADGVA RLRRTYLEGA AS
|
|---|
| |