| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4040 |
|---|
| Symbol | |
|---|
| ID | 7861138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 4468384 |
|---|
| End bp | 4470087 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643868143 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002884043 |
|---|
| Protein GI | 229822517 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGC ACCCCAGCGT CCGCACGATC ACCCCCGACT TCGCGCGCCG CACGTTCCTC
GGCCTCTCGG GCGCGAGCGC CCTCGCTGTC ACGCTCGCCG CCTGCGGCGA GGGCGGCGGC
GGCGGGGGAC CCCAGGCGCG CGAGGAGGTC GAGCTCGCGC TCCCCACCTA CGCCGCGCCG
CCGGAGGTCC CGGGAGGCAT CGTGAGCGAC GTCGAGGGCA TGCCGGTCAT GTTCACCGAG
CCGTTCCAGG AGTACTTCGA CTCCGTGGAG GCACCGCCGC TGTCCGGGGG CGAGGTGTCG
ACGTTCCAGG TGCTGTGGGG CGCCCCGCCC CGCGACAAGC CGGACAACGA GTACTGGGTC
GAGCTCGAGG AGCGACTCGG CGGGACGTTC GCCCCCACCC TCGTCGCGTT CGACACCTAC
AACGAGAAGA TGGCCACGAC CATCGCGAGC GGCGACATCC CGGACCTCCT GTTCGTCCAG
GACTCGAACG CCGTGGCGGC GAAGGCGATC GACGACGGCG TGTTCGCCGA CCTGTCCGAG
GTGCTCGCCG GCGACAACAT CCTCGAGTGG CCGAACCTCG CCAACGTCGG CACGAACGCC
TGGAAGGCCT CGGCGAAGAA CGGCCACATC TTCGGCGTCC CGAACGAGGA CCCGTACATC
AGCCAGTTCC CCGCGATCCG GTGGGACGCG ATGGAGGCGG CCGGCTTCGA CGAGATGCCC
GAGGACGCCG AGGGCTTCCT CGAGATGATG ACGGCGATCG CGGAGCTGGG GGAGCTGCAC
GGCAAGCCGA TCTACGGCAT CGGCGCATTC GAGGGCCGCG CCCAGGCGAT GGTCGAGCAG
ATGTTCCGCG CCGGCACCAC CTGGCAGCTC GACGGCGACG GCAACCTCAT CAACATCATC
GAGACCGACG TCTACGAGCA GGTGCTCGAC TTCCAGAACC GGATGTGGCA GGCCGGCGTC
TACCACCCGG ACGCCCTCGC CCTCGCGTCG CAGGGCAACC AGGCCGCGGA GATGTTCACG
AACGGGCAGT CGTGCATCTG GACCGACGCG TTCCAGGGGT TCTTCGGCTC GCAGATCCTC
AACGACGTCG CCGAGCTGAC GCCGGGCGCC GAGGCGCGCC TCTTCGTGCC GCCCGCGTTC
GACAGCGGCG ACATCGTCGT CCAGCGCAAC GACGGCTACT GGGGCATGGT CGCCATCTCC
GCGAAGGCCG CCGAGGACCC GGAGCGCCTC AAGGAGCTGC TCGGCGTCAT CAACTACTGG
CGCGCACCGG ACGCGAGCAC GGAGGCCCGG TTCATCCACT CCGGCGTCGA GGGCTGGAAC
TGGGACCTCG GCGACAACAA CGAGCTCGTC GGGATCGACG ACCCCGCCGC GCAGGCCGAC
CGGGCAGCCC TCCAGTGGCT CGGGGCGTTC AAGTCGCCGT CGTACACGAT CGCCGAGAAC
AACCTGCCCT ACGTCGACAA CTTCCGTGAG GTCGCCGAGA CCCTCATCCC GCTGTCGGTC
CCGAACGTGA CGGTCGGCCT CTACAACGAG GCCGTCGGTG CGAACGGCGC CGCCATGAGC
GAGGTCGACA CCGACTACCG GGGCGGCATC GTGAGCGGCC GCATGCCGCT CAGCGCGCTC
GAGGACTACC GCGAGGCGTG GCGGGCAGCG GGTGGCGACG CCGTCCGCGA CGAGTACCAG
GCCGCGCTGG ACGCGCAGGC CTGA
|
|---|
| Protein sequence | MSTHPSVRTI TPDFARRTFL GLSGASALAV TLAACGEGGG GGGPQAREEV ELALPTYAAP
PEVPGGIVSD VEGMPVMFTE PFQEYFDSVE APPLSGGEVS TFQVLWGAPP RDKPDNEYWV
ELEERLGGTF APTLVAFDTY NEKMATTIAS GDIPDLLFVQ DSNAVAAKAI DDGVFADLSE
VLAGDNILEW PNLANVGTNA WKASAKNGHI FGVPNEDPYI SQFPAIRWDA MEAAGFDEMP
EDAEGFLEMM TAIAELGELH GKPIYGIGAF EGRAQAMVEQ MFRAGTTWQL DGDGNLINII
ETDVYEQVLD FQNRMWQAGV YHPDALALAS QGNQAAEMFT NGQSCIWTDA FQGFFGSQIL
NDVAELTPGA EARLFVPPAF DSGDIVVQRN DGYWGMVAIS AKAAEDPERL KELLGVINYW
RAPDASTEAR FIHSGVEGWN WDLGDNNELV GIDDPAAQAD RAALQWLGAF KSPSYTIAEN
NLPYVDNFRE VAETLIPLSV PNVTVGLYNE AVGANGAAMS EVDTDYRGGI VSGRMPLSAL
EDYREAWRAA GGDAVRDEYQ AALDAQA
|
|---|
| |