Gene Bcav_4039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4039 
Symbol 
ID7861137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4467578 
End bp4468153 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content75% 
IMG OID643868142 
Productprotein of unknown function UPF0157 
Protein accessionYP_002884042 
Protein GI229822516 
COG category[S] Function unknown 
COG ID[COG2320] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTTC CCGATGAGGT GGCCCCCGTG CGCGTCGTCC CGGCTCGCGC GGGATGGGCG 
GCCGAGGGCT CCGAGCTCGT GGCGTCGCTC GACCGCGCGC TCGGGCCGCT CGCGGTCGCC
GTCGACCACA TCGGCTCGAC ATCCGTGCCG GGGCTGCCCG CCAAGGACTG CCTCGATGCG
ATGGTGCGCG CGTCCGACCT CGACGGCGTC GCCGACCGTC TCGTGGCGCT CGGCTACCGC
CTGCGGCCCG AGCCGTGGAA CGCCGAGGAC GTCACGTGGG GCGAGGCGTG GCCGAAGCGC
GTGCTGGCCC CCGCCGTCGG CGCACGCAGG TGCAACGTCC ACGTGCGGCT GCCCGGGTCC
GGCAGCGCCC GCTACGCGCT GCTCTTCCGC GACTACCTGC GCGCCGACGC CGAGGCCCGC
GACGCCTGGG GGCGGTTCAA GCTCCGCCTC GCCGCGAGCG TGCCCGACAT CGCCGGCTAC
GGCCAGATCA AGCAGCCAGC GACGGAGGTG CTGATGCGCG GCGCTGAGGG GTGGGCGACG
CGGGTCGGCT GGACGGAGAA CAGGTCGGAG GGCTGA
 
Protein sequence
MPFPDEVAPV RVVPARAGWA AEGSELVASL DRALGPLAVA VDHIGSTSVP GLPAKDCLDA 
MVRASDLDGV ADRLVALGYR LRPEPWNAED VTWGEAWPKR VLAPAVGARR CNVHVRLPGS
GSARYALLFR DYLRADAEAR DAWGRFKLRL AASVPDIAGY GQIKQPATEV LMRGAEGWAT
RVGWTENRSE G