| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4017 |
|---|
| Symbol | |
|---|
| ID | 7861115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4443318 |
|---|
| End bp | 4445081 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643868120 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002884020 |
|---|
| Protein GI | 229822494 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0252355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.492904 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGCG CGACCACCGA CGCCCGCCCG TACCCCCGCC CCGACTGGAC CTTCGTCCTC
GCCGACTCCC TCGAGAAGGT GTTCCCCGAC GTCGCGCCGC GGCCGATGAG CCGGCCGGAG
CTCTCGGGGT TCCTCGGCGA GGCGCTCGCC GTCCAGCTCG CCTTCTTGCC CCCGGCCGCC
CACAGCCCCG CCGCGATCGG ACCGGTGACG GTCCGGGCGC GCGGCGAGCT CGCCCACCTC
GCGCGGCTCA GCACCGTCGA GCTCGTGCCG TGCCAGCTCC CCGCGTTCGA CGGCCACGAC
GACGGCTACC TCCGCGATAC GCCAGGGCTG TACCCCGACC TGCTGCGGCC GATCGAGCAG
GCGGACGCCG GCGACGCCCG GGCCGGCGCC CCAGGCGCCG TCGACGCCGC CGGTCTCGCC
GGCACGCTCC ACCCACGCCT GGGCTACTGG CAGGCGGTGT GGGTCGACCT CCAGGTCGAC
GACCCCGCGC TCGCCGGGCG CCGCACCCTC ACGCTCGAGA TGAGCGACGC CGACGGCAAG
CCGCTGCACA CGGCCGAGCT CGCCGTCGTC GTCCATCCCG TGGCCCTGCC CGCGCTCGAC
ATCGTCAACA TGCACTGGCT GCACGCCGAC AGCCTCCTGA CGTACTACGG CGTCGACGCG
TTCAGCGAGG AGCACTGGCG CCTGCTCGAG GAGTACGTGG CCTCCGCCGC GGCGATGCGC
GCCAACTCGC TGCTCACGCC GACGTGGACG CCGCCCCTCG ACACCGCGAT CGGCGGTACA
CGCCCGCCCG TCCAGCTCGT CGGGATCAGC GACGACGACG GCGGGGCGTA CGCGTTCGAC
TTCTCCCGCC TCGGGCGGTG GCTGGCGCTG TGCAAGCGGC ACGGCATCAC CACGCTCGAG
GTCGCACACC TCTTCACGCA GTGGGGTGCG ACGGCGACGC CGGCGATCTA CGTCGAGACG
CCGTCGGGCA CCGAGCAGCG CTTCGGCTGG CACGTGCCGG CGACCGACCC GAGCTACCGC
GAGCTGCTCG CCTCGCTGCT GCCCGCGCTG CGCGGGTACC TCGCGGAGCA CTGGTCGGGC
GACGTGATCT TCCACGTGAG CGACGAGCCG CGCCCTGAGA TGTTGAGCGA CTACCGGGAG
GCGCGGGCCG TCGTCGACGA CCTGCTCGAC GGCGCCACGA TCGCCGACGC GCTGAGCGAT
CTCGCGTTCG CGCAGGACGG CGTCGTGGAC ACGCCGATCG TGGCCACGAA CCACGTGCAG
CCGTTCCTCG ACGCCGGGAT GACGCCGTGG GTGTACTACT GCGTGTCGCA GAACCGCGAC
GTCGCGAACC GGTTCATCGC GCTGCCCTCC GTGCGCAACC GCGTGCTGGG GCGGCAGCTG
TTCGCGTTCA GCGCCCCCGG GTTCCTGCAC TGGGGCTTCA ACTTCTGGTT CGCGCAGCAC
TCGACCCGCC CGATCGACCC GCACGCCGAC ACCTCCGCCG GCGGCGCGTT CCCCTCGGGC
GACCCGTTCA TCGTGTACCC GGGGCCCAAC GGCGAGGCGT GGCCGTCGCT GCGGCACCGC
GTGTTCGCGC AGGCGATGGA CGACCACCGG GCGCTGCAGC TCCTGCGGAC GCTCACGGAC
CAGGCGACGG CGCGGTCGTA CGTCGACGAG GGCGGTGCCC TGGCGTACGA CGCGTTCACC
TACGACCCCG AGCACTACCT GGAGACGCGT CGCGCCGTCG ACGCGCGGAT CCTCGCCGAG
CTCGCCGGCG CCCGGGCTAC GTGA
|
|---|
| Protein sequence | MRRATTDARP YPRPDWTFVL ADSLEKVFPD VAPRPMSRPE LSGFLGEALA VQLAFLPPAA
HSPAAIGPVT VRARGELAHL ARLSTVELVP CQLPAFDGHD DGYLRDTPGL YPDLLRPIEQ
ADAGDARAGA PGAVDAAGLA GTLHPRLGYW QAVWVDLQVD DPALAGRRTL TLEMSDADGK
PLHTAELAVV VHPVALPALD IVNMHWLHAD SLLTYYGVDA FSEEHWRLLE EYVASAAAMR
ANSLLTPTWT PPLDTAIGGT RPPVQLVGIS DDDGGAYAFD FSRLGRWLAL CKRHGITTLE
VAHLFTQWGA TATPAIYVET PSGTEQRFGW HVPATDPSYR ELLASLLPAL RGYLAEHWSG
DVIFHVSDEP RPEMLSDYRE ARAVVDDLLD GATIADALSD LAFAQDGVVD TPIVATNHVQ
PFLDAGMTPW VYYCVSQNRD VANRFIALPS VRNRVLGRQL FAFSAPGFLH WGFNFWFAQH
STRPIDPHAD TSAGGAFPSG DPFIVYPGPN GEAWPSLRHR VFAQAMDDHR ALQLLRTLTD
QATARSYVDE GGALAYDAFT YDPEHYLETR RAVDARILAE LAGARAT
|
|---|
| |