| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4012 |
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| Symbol | |
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| ID | 7861110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4436804 |
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| End bp | 4437808 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 643868115 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_002884015 |
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| Protein GI | 229822489 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.191711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.94998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTT CGACATCACC CGAGGAAAGC GCGACACTGG TCCGCGTGAC CTCCACTCGG
ACCCTGCGGG TCGGCACCCG GGCCAGCGCC CTCGCGACCA CGCAGTCCGA GTGGGCCGGC
GAGGCGATCG CCGCTCGGGT CGCGGCTGCC ACGGGATCCG ACGTCGAGGT CGAGCTGGTG
CGTGTCACGA CCACGGGCGA CGTGCTCACC GGCTCGCTGG CCTCGATGGG TGGGACGGGC
GTCTTCGTCA CGGCGCTGCG GGAGGCCCTG CTCGACGGAC GGTGCGACGT CGCCGTCCAC
TCCCTCAAGG ACCTCCCCAC CGCCGCCGCT CCCGGCCTGG TCCTGGGCGC CGTCCCGCAG
CGCGAGGACC CCCGGGACGT GCTGTGCGCG CGGGCGGGCG CGGGACTCGC GGACCTGCCC
GCGGGTGGTC GGGTCGGGAC GGGCTCGCCC CGGCGGGCCG CGCAGCTGCG GCGCGCCCGG
CCGGACCTCG AGATCGTGGA CATCCGCGGC AACGTCGACA CCCGCCTGAG CCGCATCTCC
CCGGGGAAGG GCGACCTCGA CGCCGTCGTC CTGGCTCGCG CCGGCCTCGC CCGGCTCGGC
CGGCTCGACG CCGTGACCGA GGCGCTCGAC GCCGGCGTCA TGGTGCCGGC CCCCGGCCAG
GGCGCCCTCG CCGTCGAGGC CGTCGACGCC GCACCCGACT GGCTCCTGGC TGGGCTCCGC
GCGTTCGACG ACGCCCCCAC GCGGCTCGCC GTCACCGCCG AGCGCGCGAT GCTCGCCCGG
CTCGAGGTCG GCTGCTCGGC GCCGGTCGGG GCGCTCGCCA CGCTCGCCGG GTCACAGCTC
CTCCTGCGGA CCTCCGTGGG CGAGGACGCC GAGGACCTCG GCGGCTCGTT CCGCGTCGGC
CTGCCGGACG ACGACGACGC TCGGCTCGAC GCCGCCGCCG GGCTCGGGCG GGCGGCCGCC
GAGGCCGCGC TCGCCCGCAT AGAGGCGGGC GGGCCGCCGT CGTGA
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| Protein sequence | MTTSTSPEES ATLVRVTSTR TLRVGTRASA LATTQSEWAG EAIAARVAAA TGSDVEVELV
RVTTTGDVLT GSLASMGGTG VFVTALREAL LDGRCDVAVH SLKDLPTAAA PGLVLGAVPQ
REDPRDVLCA RAGAGLADLP AGGRVGTGSP RRAAQLRRAR PDLEIVDIRG NVDTRLSRIS
PGKGDLDAVV LARAGLARLG RLDAVTEALD AGVMVPAPGQ GALAVEAVDA APDWLLAGLR
AFDDAPTRLA VTAERAMLAR LEVGCSAPVG ALATLAGSQL LLRTSVGEDA EDLGGSFRVG
LPDDDDARLD AAAGLGRAAA EAALARIEAG GPPS
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