Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_4010 |
Symbol | hemE |
ID | 7861108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4434112 |
End bp | 4435224 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643868113 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_002884013 |
Protein GI | 229822487 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.961191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGAT TCAACCATTC GGAGTTTCTC CGTCACAATC GACGTGTGAA TCACCACACC GCCGCTTCGC CGTCCCCGGA CAATTCGCCC TTGCTCGCCG CCTATCACGG TCGGCCCGTC GGGCCCGCGG TGTGGTTCAT GCGGCAGGCC GGTCGCTCGC TCCCCGAGTA CCGCGCGGCG CGCGCCGGGA CCGAGATGCT CGAGGCGTGC CTCACCCCGG AGCTCGCCGC CGAGATCACG CTGCAGCCCG TCCGGCGGCA CGGCGTCGAC GCCGCGATCT TCTTCTCGGA CATCGTCGTC CCGCTCGCCC TCGCCGGCGT GGACGTCCAC ATCGAGCCCG GCCTCGGCCC GGTGATCGCG GAGCCGGTCC GCGACGCCAC GGCCGCACGT GCGCTCGCCG CGCGCGCCCC GGGCGACGCC GCCCGGATCA CCGAGGCCGT CCGGCTCACC GTCGCGGAGC TGGGCGCGAC GCCGCTCATC GGCTTCGCGG GGGCACCGTT CACGCTCGCG GCGTACCTGG TCGAGGGCCG CCCGTCCCGC GACCACCTCG CCGCGCGCAC GATGATGCAC GCCGACCCCG AGGCGTGGGA CGCGCTGCTC GGCTGGGTGG CCGAGATCTC GGGCGCGTTC CTGCGGGCGC AGGTCATGGC CGGTGCGAGC GCCGTGCAGC TGTTCGACTC GTGGGCCGGG TCGCTCGGCC GCGCCGACTA CGCCGCCCAC GTCCAGCGCT ACAGCGCCCG CACGCTCGAC GCCGTCGCCG ATCTCGGCGT GCCCATGGTC CACTTCGGCA CGGGGACGTC CGACCTGCTC GACCTGCTGC GCGACGCGAT CCCCGCCGGC TCGCCCGGCA CGGGACCCGC CGTCGTCGGC GTCGACCACC GCATCGGGCT CGACGAGGCG AACGCGCGTC TGGGCGGCGC GACGCCGCTG CAGGGCAACA TCGACCCGGC GTTCCTCGCC GCCCCCTGGC CGGTGCTCGA GGCGCACGTG CGGGACGTCG TCGCGCGCGG CACCGCTGCC CCGGGGCACG TCGTCAACCT CGGCCACGGC GTGCCGCCGG ACACCGACCC GGGCGTGCTC ACGCGCGTCG TGGAGCTCGT GCACGGTGGC TGA
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Protein sequence | MRRFNHSEFL RHNRRVNHHT AASPSPDNSP LLAAYHGRPV GPAVWFMRQA GRSLPEYRAA RAGTEMLEAC LTPELAAEIT LQPVRRHGVD AAIFFSDIVV PLALAGVDVH IEPGLGPVIA EPVRDATAAR ALAARAPGDA ARITEAVRLT VAELGATPLI GFAGAPFTLA AYLVEGRPSR DHLAARTMMH ADPEAWDALL GWVAEISGAF LRAQVMAGAS AVQLFDSWAG SLGRADYAAH VQRYSARTLD AVADLGVPMV HFGTGTSDLL DLLRDAIPAG SPGTGPAVVG VDHRIGLDEA NARLGGATPL QGNIDPAFLA APWPVLEAHV RDVVARGTAA PGHVVNLGHG VPPDTDPGVL TRVVELVHGG
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