Gene Bcav_3986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3986 
Symbol 
ID7858049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4409245 
End bp4410816 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content72% 
IMG OID643868089 
ProductAlkaline phosphatase 
Protein accessionYP_002883989 
Protein GI229822463 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3540] Phosphodiesterase/alkaline phosphatase D 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.475008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGCAC CGACGTCCAC CCTCGCCCGC CGTTCCTTCC TGACGATCGC CGGGGTCGCC 
TCGAGCGGCG CCGTCGTCGC CGCCGCGGCG CCCGCCGTCG CCGCTCCCGC CGGGCCCGTG
CCGCGTGACC CGCTCTTCAC GCTCGGGGTC GCCTCCGGCG ACCCGCACCC GGACGGCGTC
GTGCTCTGGA CCCGGCTCGC CCCCGACCCG CTCGCGACCG ACGGCCGCGG AGGCATGCCC
GACCGCGTCG TCCCCGTCAC GTGGGAGGTG GCCGAGGACG AGCGGTTCCG CCGGATCGTG
CGCCGGGGGG TCGAGCACGC CAGCGCCGCG TGGGCTCACA GCGTCCACGC CGAGGTGCAC
GGACTGAGAC CGGACCACAC GTACTGGTAC CGGTTCCGCG CCAACGGCCA GGCGAGCCCC
GCGGGCCGGA CACGGACAGC TCCCGCGCCC GGGGCGCGCC TGCGCGAGCT CAGGTTCGCG
TTCGCGAGCT GCCAGAACTA CTCGGTCGGC TTCTTCACGG CGCTGCGACA CCTGGCCCAC
GAGGACGTCG ACTTCCTCGT GCACCTCGGT GACTACATCT ACGAGGGGGA CGCGGCAGGC
GACATCGGCC GCGCCCACCT CCCGGCGGTG GAGCTCTACT CGCTGACCGA CTACCGCCTC
CGGTACTCCC AGTACAAGCT CGACGCCGAC CTTCAGGCGG CCCACCACGC CCACCCGTGG
ATCGTCGCGC CCGACGACCA CGACCTGGAG AACAACTGGG CGGGCGACCA CTCGGAGCCG
GACGACGAAC CGGACCAGGA CCCGGCAGTC TTCCGGCAGC GGCGCGCCGC CGCGTACCAG
GCGTACTGGG AGAACCTTCC GCTTCGCCGC TCCTCCATGC CCCGAGGTCC GGAGATGCAG
GTCTTCCGGC GGCTCGTGTT CGGCGACATG CTGCAGCTCG ACGTGCTCGA CACCCGGCGC
TTCCGGGATC CGCAGGTCAC GGATCAGGCC GACCGGTGGA ACCCCGAGCG CCAGATCCTC
GGTCCGGAGC AGGAGGCGTG GCTGCTGGCC GGTCTCGGGG CTGCCACAGC GCGCTGGAAG
GTGCTGGGCA GCCAGGTCTT CATGTTCGAC GCCGACACGG TCACGGGTCC GGGCGAGCGG
TACGGCACCG ATCCGTGGCC CGGGTACGCC GCCGCCCGCC AGCGTCTGTT CGACGGTCTG
GCAGAGCGCG ACGTCGACAA CTTCGTCGTG CTCTCCGGCG ACGCACACCG GAGCGCGGCG
GCGGACCTCA AGCTCAGCTT CGCGGACGAG GGCTCGCCGA CAGTCGGCAC GGAGTTCCTC
GGCACGTCGT TGACGTCGGG CAAGGACGGA TCCGACATGG ACGGCACCGG CACCGTGTGG
CTGGCGGAGA ATCCTCACCT GCGCTTCCAC AATGCGCAGC GGGGATACCA GGTGTGCCGG
CTCGGGAGGG ACGAGATGCA CACGGAGTAC CGCATCGTCC CCTACGTCAC GAGCCCGGGC
GCCCCGATCA CGACGCGAGC GACGGTGTTC GTCGAGTCGG GGCGCCCCGG CGTCGCGCAC
GTCAGCGACT GA
 
Protein sequence
MPAPTSTLAR RSFLTIAGVA SSGAVVAAAA PAVAAPAGPV PRDPLFTLGV ASGDPHPDGV 
VLWTRLAPDP LATDGRGGMP DRVVPVTWEV AEDERFRRIV RRGVEHASAA WAHSVHAEVH
GLRPDHTYWY RFRANGQASP AGRTRTAPAP GARLRELRFA FASCQNYSVG FFTALRHLAH
EDVDFLVHLG DYIYEGDAAG DIGRAHLPAV ELYSLTDYRL RYSQYKLDAD LQAAHHAHPW
IVAPDDHDLE NNWAGDHSEP DDEPDQDPAV FRQRRAAAYQ AYWENLPLRR SSMPRGPEMQ
VFRRLVFGDM LQLDVLDTRR FRDPQVTDQA DRWNPERQIL GPEQEAWLLA GLGAATARWK
VLGSQVFMFD ADTVTGPGER YGTDPWPGYA AARQRLFDGL AERDVDNFVV LSGDAHRSAA
ADLKLSFADE GSPTVGTEFL GTSLTSGKDG SDMDGTGTVW LAENPHLRFH NAQRGYQVCR
LGRDEMHTEY RIVPYVTSPG APITTRATVF VESGRPGVAH VSD