| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3978 |
|---|
| Symbol | |
|---|
| ID | 7858041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4399092 |
|---|
| End bp | 4400726 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643868081 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002883981 |
|---|
| Protein GI | 229822455 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.461559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCCG ACGCGCCGCC CGGCCCTAGG GTGAGCGCAG CGACGACGAA GGGGAGTGTC
GTGACGATGG CGGGGGACGG CGCGCACGTG CGCGCGACGC TGCATGTGGA CGGCTCGGGT
GAGGTGCACA TCGGCGACGC CGTGCATCCG TTGCGCGGGG ACGGTCTGGC CGGTGGGCGG
CAACGGCTGA GCGAGGTGCT CGTCGCGCAC GCACGGACGA GCGGGCCGGG CGGTGTCCGG
GCGCTCGTCG ACGACCCGGA GGGGACGTGG CACCTCCACG TCTCTCCGGA CGGACGGGTC
GAGGAGGTGC GCCGGCCCGA CGAGGCGACG ACCGACACGC CGCCCGACGG CATCGACGTG
ACGAGGGTCC GCACACCGGG GGTCACCGTC AACCGTGCCG CGGGCGGCAC GGCCAGCGAC
TTCGCCGGAC GTCTCAACCT CCCGCCCTCC CCTCGTGCGG CCCCGCCGAC GACGGCGCCC
GCGGCCGAGG CGGTCGCGTC GCCACCCGCT GCCGACGCGC ACCCCGCGCC CCGGCCGCCG
GCCGCCGAGC CGCAGCCCGC CTCCCGGCAA CCAGCCGAGC CGCAGCCCGC GCCGGCGGCC
ACCCTCCCGA CGCACGGGAC GCCGTCGTCG TCCCCCGCTC AGGCGCCCTA CCCGCAGCCC
TCCGCGCAGG CGGCGCCGGT CGCGCCCCCG GCACCAGTTG CGCCCCCCAG CGCGCCGGAG
GCGGCGCCGA GCCGATCGTT CCTGACGTCG ACGACGCGCG AGGAGCCGGC CAGGTCCGGT
GTGCGCGGCG GGCTGAACCG CGTGGGCTTC AAGCTCGCCC CGGGGCAGAA GGAGCAGGGC
CTGCGGGCCG CGGTCCGCGC GATGAGCCAG CACTGGCCGG GACCTCGGAC GATCAGCGTG
GTGAACGGCA AGGGCGGTGC CGGCAAGACG ACCGACACGA TCATGCTCGC CGCGATGTTC
GCCACGTACG GCGGCTCCGG CGTCCTCGCG TGGGACAACA ACGACACGCG CGGCACGCTC
GGCTGGCGCA CCGAGCAGGG CAGCCACGAC GCGTCGATCA TGGACCTGCT CCCGCATGTC
GAGCGGCTGC TCTCACCGGA CGCGAACGCC TCGGACCTCG CGTACTTCGT GCACCACCAG
GTCAGCGACA AGTACGACGT GCTGCGCTCG CGGCCCGAGG TGCTCGCCAC GCAGCAGCGC
ATGACGGCGG AGGCGTTCGA CGCCGTGCAC CGCGTGGCGG CGAAGTACTA CCGGCTCATC
CTCGTGGACT CGGGCAACGA CGAGTCGGCC GAGCGGTGGC TGCAGATGGT CGAGCGGACC
GACCAGCTCG TCGTGGCGAC GTCCACGCTC GAGGAGCACG CCGAGGCGGG CCGGCTGCTG
CTGCTCGAGC TCGCCGAACG CGGCGAGAGG GCAGCCGCAC TGGCGGCGAA CGCCGTCGTC
ATCGTGTCGC ACGCGGATCG CGACGAGGCC GCACCCGCGC ACATCGCTGA CGGCTTCCGG
CGGATCGCGC GGGACGTCGT CGCCATCCCG TACGACCACG GGATGCGGGC GCGGCCCCTG
CGGTTCGGGT CGCTGCGCGG CGAGACCCGC GACGCGTGGC TGCGCGCGGG CGCGGCGGTG
GCCGCCGGGC TCTGA
|
|---|
| Protein sequence | MGADAPPGPR VSAATTKGSV VTMAGDGAHV RATLHVDGSG EVHIGDAVHP LRGDGLAGGR
QRLSEVLVAH ARTSGPGGVR ALVDDPEGTW HLHVSPDGRV EEVRRPDEAT TDTPPDGIDV
TRVRTPGVTV NRAAGGTASD FAGRLNLPPS PRAAPPTTAP AAEAVASPPA ADAHPAPRPP
AAEPQPASRQ PAEPQPAPAA TLPTHGTPSS SPAQAPYPQP SAQAAPVAPP APVAPPSAPE
AAPSRSFLTS TTREEPARSG VRGGLNRVGF KLAPGQKEQG LRAAVRAMSQ HWPGPRTISV
VNGKGGAGKT TDTIMLAAMF ATYGGSGVLA WDNNDTRGTL GWRTEQGSHD ASIMDLLPHV
ERLLSPDANA SDLAYFVHHQ VSDKYDVLRS RPEVLATQQR MTAEAFDAVH RVAAKYYRLI
LVDSGNDESA ERWLQMVERT DQLVVATSTL EEHAEAGRLL LLELAERGER AAALAANAVV
IVSHADRDEA APAHIADGFR RIARDVVAIP YDHGMRARPL RFGSLRGETR DAWLRAGAAV
AAGL
|
|---|
| |