Gene Bcav_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3974 
Symbol 
ID7858037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4394161 
End bp4394691 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content73% 
IMG OID643868077 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002883977 
Protein GI229822451 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.767882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCTGGG ACAACACAGA GGGACCCGCC GTGGAACCGG AGGCCGCCGT CGCCGAGGCC 
GTGCGCGTGG CCGACGACGG TCTCGCGCGC GGCGAGATGC CGATCGGCGC CGTCGTCTTC
GCCGGTGAGG ACGTGATCGG CCGGGCGTTC ACCCAGGAGC AGAGCCTCGG CCGACGCATC
GTCCACGCCG ACCTCCTCGC CATGATCGCC GCTGACGAGC ACCGGGGATT CGACCGGTCC
GCGGGTCCGC TGACGCTCGC GGTCAACCTC GAACCCTGCC TGATGTGCCT CGGTGCGGCG
ATCACGCTCG GCGTCGAGCG GGTGTTCTAC GGCCTGGCGT CACCGAACGA CGGCGGCGTC
GAGCTGCTCG CCCAGTGGCG GCCCCCGGTC GAGCAACAGT TCTTCCGTCG CCCGCGGGAG
ATCCGTGGCG GGTTCCAGGG CGACGCCGTC CGCCGTCAGT TCGCGGGGTA TGCCGAGGGG
TCCGGGCCCG CCGGCATGCG CGCCTGGGCA CGGGAGCTGG CCGGCGGGTG A
 
Protein sequence
MPWDNTEGPA VEPEAAVAEA VRVADDGLAR GEMPIGAVVF AGEDVIGRAF TQEQSLGRRI 
VHADLLAMIA ADEHRGFDRS AGPLTLAVNL EPCLMCLGAA ITLGVERVFY GLASPNDGGV
ELLAQWRPPV EQQFFRRPRE IRGGFQGDAV RRQFAGYAEG SGPAGMRAWA RELAGG