Gene Bcav_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3970 
Symbol 
ID7858033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4390736 
End bp4391125 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content64% 
IMG OID643868073 
Productmembrane protein of unknown function 
Protein accessionYP_002883973 
Protein GI229822447 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.401877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATTCC TCGTCCGAGT CATCGTCAGC TCGATCGCCG TGTGGCTGAC CGCCCTCTGG 
ATCAACGGCA TCGAGCTCAC TCAGGCCGAC GAGCCGATCA ACCAGGTCGT CATCGTCCTC
GTGGTCGGCC TGGTCTTCGC GCTCGTCAAC GCGATCGTCA AGCCGATCGT CAAGGTGCTG
ACGTTCCCGC TCTACATCCT CACGCTCGGG TTGTTCGGAC TCATCGTCAA CGCGCTGCTC
CTGATGCTCA CGGGGTGGAT CACGGGCTAC ACCCAGTGGG GTCTGACCGT CGACGGGTTC
TGGCCCGCGT TCTGGGGCGG CCTCGTCATC TCGATCATCA GCGGGATCCT GTCGCTCATC
CTCCCGTCGG GGAAGTCCAA CCGGGGCTGA
 
Protein sequence
MGFLVRVIVS SIAVWLTALW INGIELTQAD EPINQVVIVL VVGLVFALVN AIVKPIVKVL 
TFPLYILTLG LFGLIVNALL LMLTGWITGY TQWGLTVDGF WPAFWGGLVI SIISGILSLI
LPSGKSNRG