| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3965 |
|---|
| Symbol | |
|---|
| ID | 7858028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4384677 |
|---|
| End bp | 4386212 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643868068 |
|---|
| Product | catalytic domain of components of various dehydrogenase complexes |
|---|
| Protein accession | YP_002883968 |
|---|
| Protein GI | 229822442 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.147866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAAGT TCCAGCAGTT CGCCCTTCCC GACGTCGGCG AGGGCCTCAC GGAGGCCGAC
ATCGTCACCT GGCACGTCGC CGTCGGGGAC ACGGTCTCCG TCAACCAGAC GATCGTCGAG
ATCGAGACGG CGAAGTCCCT CGTCGAGCTG CCGTGCCCGT GGGACGGCGT CGTGACGCGG
CTGCTCGTCG AGCCCGGGCA GACGGTCGAC GTCGGCACTC CCATCGTCGT CGTGGACGTG
GACCCCGCCG GCCCCGCGGA CGCCGCGGAT CCCGCGCCGG CCGACGCCTC GGCGGCTGCG
CCTGCGGCAT CGGCGGCATC CGAGGGGTCC GAGGCGTCGT CGGAGGGGAG CGGCGACGTG
CTCGTCGGGT ACGGCACACG CCCGGCCGCC TCCGCGCGGC GTCCGCGCAC GACGGGCGGT
GCGGCGTCGG GAGGGACGAC GGCGACCGCG GCATCGGGAC GGACGACGGC GACCGCGGCG
TCGGGTGCGG CGTCCGGCGG CCCGGCGGCC GGCTCGGACG CGCGGCCGAC GCCCGGCCTG
CGTGCCGTCC CCGCCGTGGG CGGCGCACCG ACCCGACCCC CAGCCGTGGT GACGCCTCCT
GCGTCCGCCG CGACGCCGTC GTCATCCACG CATCTGGTGC TCGCGAAGCC GCCGGTCCGC
AAGCTCGCGA AGGACCTCGG CATCGACCTG ACGACCGTGA CGCCGTCCGG ACCGGGCGGC
ATCGTCACGC GCGGCGACGT GCTGGCGCGG TCGCAGGGCA ACGAGCCGCG TCAGCTCGCG
ACCTACCCCG GCGACGACAA GCCGTGGCTC GCGGACGGCT CCGTGTCCGA CGACGGCCGC
CAGACCCGCG TCCCGGTGCG GTCAGTACGG CGCCGGACGG CGGAGGCGAT GGTCGCCTCC
GCGTTCACCG CGCCGCACGT GACGGTGTTC CGGACCGTCG ACGTGAGCCG CACGATGGAG
CTCGTCGCCC AGCTGCGCTC GGACCGCGAG TTCGAGGACG TGCGGGTCAC ACCGCTGCTC
ATCACGGCGA AGGCGCTGAT CCTCGCGATC CGGCGGCACC CGGAGATCAG CGCGTCCTGG
GACGACGAGA CCCAGGAGAT CGTCTACAAG CACTACATCA ACCTCGGGAT CGCGGCGGCG
ACGCGGCGCG GGCTGGTCGT GCCCAACATC AAGGACGCCC ACCGGCTGAC GCTCCACGAG
CTCGCCGGCG AGATCGCGGC GCTCACCCAG ACCGCCCGCG AGGGGAAGAC CACGCCGGTC
GGGATGAGCG ACGGCACGGC GACCATCACG AACATCGGCG TGTTCGGGAT CGACGCCGGG
ACGCCGATCC TCAACCCGGG CGAGTCCGCG ATCCTCGCGC TGGGCGCCAT CGAGCAGCGG
CCCTGGGTGC ACGACGGCGA GCTCGCCGTG CGCTGGGTGA CGCAGCTCGC GCTGTCGTTC
GACCACCGGC TCGTCGACGG CGAGCTCGGC TCGCGGGTGC TGGCCGACGT CGCCCGTGTG
CTCGAGGACC CGGCGCGCGG CCTCGTCTGG GGCTGA
|
|---|
| Protein sequence | MPKFQQFALP DVGEGLTEAD IVTWHVAVGD TVSVNQTIVE IETAKSLVEL PCPWDGVVTR
LLVEPGQTVD VGTPIVVVDV DPAGPADAAD PAPADASAAA PAASAASEGS EASSEGSGDV
LVGYGTRPAA SARRPRTTGG AASGGTTATA ASGRTTATAA SGAASGGPAA GSDARPTPGL
RAVPAVGGAP TRPPAVVTPP ASAATPSSST HLVLAKPPVR KLAKDLGIDL TTVTPSGPGG
IVTRGDVLAR SQGNEPRQLA TYPGDDKPWL ADGSVSDDGR QTRVPVRSVR RRTAEAMVAS
AFTAPHVTVF RTVDVSRTME LVAQLRSDRE FEDVRVTPLL ITAKALILAI RRHPEISASW
DDETQEIVYK HYINLGIAAA TRRGLVVPNI KDAHRLTLHE LAGEIAALTQ TAREGKTTPV
GMSDGTATIT NIGVFGIDAG TPILNPGESA ILALGAIEQR PWVHDGELAV RWVTQLALSF
DHRLVDGELG SRVLADVARV LEDPARGLVW G
|
|---|
| |