Gene Bcav_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3953 
Symbol 
ID7858016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4373102 
End bp4373851 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content74% 
IMG OID643868056 
ProductMethyltransferase type 12 
Protein accessionYP_002883956 
Protein GI229822430 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.988562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.116443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACA ACATCTTCGA GCACCCCCGG CTGGCCGCGG TCTACGACCC GCTCGATCCG 
GACCGCAGCG ACCTCGACCA CTACGCGGCC ATGGTCGAGG AGTTCGGCGC CCGCGCCGTG
CTCGACGTCG GCTGCGGCAC CGGCACGTTC GCGACGATGC TCGCGGCGCG CGGGGTCGAC
GTCGTCGGCG TCGACCCTGC GGCGGCGTCG CTGGACGTCG CCCGCGGCAA GCCCCACGCG
GACGCGGTGA CCTGGATCCA CGGCGACGCG ACGACGCTCC CGCCGCTGCA GGTCGACCTC
GCGGTGATGA CCGGCAACGT CGCGCAGGTC TTCCTCACCG AGGAGGAGTG GGCTGCCACG
CTGGCCGGCG TCCGCGCCGC GCTGCGCCCC GGCGGGCGGT TCGTGTTCGA GACGCGCGAC
CCGGCGAAGG AGGCGTGGCG CCGCTGGACG CGTGAGGCGA CGCACGCCGT CGTCGACGTC
CCCGGCGTCG GTGAGGTGGA GTCCTGGAAC GACGGGACGG ACGTCGAGGA GGATCGCGGT
CCGGGGACCT ACGTCACGTT CCGGGGTGTG GTCCGCTTCG CGTCCGACGG CGCCGAGCTG
CGCTCGACCT CGACGCTGTG GTTCCGCGGG CGCGAGCTGC TCGACGCGTC GCTCGAGGCG
GCCGGGTTCG TGGTCGACGA GGTCCGCGAC GCCCCGGACC GGCCCGGGCT CGAGTTCGTC
TACGTCACGC ACCGTCCGGC GGAGGACTGA
 
Protein sequence
MPDNIFEHPR LAAVYDPLDP DRSDLDHYAA MVEEFGARAV LDVGCGTGTF ATMLAARGVD 
VVGVDPAAAS LDVARGKPHA DAVTWIHGDA TTLPPLQVDL AVMTGNVAQV FLTEEEWAAT
LAGVRAALRP GGRFVFETRD PAKEAWRRWT REATHAVVDV PGVGEVESWN DGTDVEEDRG
PGTYVTFRGV VRFASDGAEL RSTSTLWFRG RELLDASLEA AGFVVDEVRD APDRPGLEFV
YVTHRPAED