Gene Bcav_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3947 
Symbol 
ID7858010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4366493 
End bp4367311 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content75% 
IMG OID643868050 
Productacetoin dehydrogenase 
Protein accessionYP_002883950 
Protein GI229822424 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.203459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC AGGTGCGGCA GGTCGCCGTC GTGACGGGGT CGGAGTCGGG CATCGGACGG 
GCGTGCGCGA TCGCGCTCGC CGAGGCGGGG TTCGACGTCG GTCTCCTCTG GTTCGCCTCC
GGTGAGGGAC GCAGCGTCGA GACGACGGCG GAGCTCGCCC GCGCGGCGGG GGCGCGGGTG
GCGACGCAGC GGCTCGACGT GCGTGACGCC GACTCCGTGG ATCCCGCCCT CGATGCCCTG
GTCGGCGAGC TGGGACGCCT CGACGCCCTC GTCAACGTGG CGGGGGTCGG CGGGCGGGCG
GCGTTCGTCG ACCTCTCGCT CGAGCTGCTG CGGCAGGTGG CCGCCGTCGA CCTCGAGGGC
CCGTTCCTCC TCGCCCAGGG GGCTGCGCGC CGGATGATCG CGGCGGGTCG CGGCGGCCGG
ATCGTGAGCA TCACGAGCGT GCACGAGCAC CTGCCGCGCA TCGGGACGGC CGCGTACAGC
ACGGCGAAGG CCGGGCTCGG GATGATGATG CGGGCGGCGG CGCTCGAGCT CGCGGAGCAC
GGGATCACGG TGAACGCTGT GGCGCCCGGT GAGGTGGCGA CGCCGCTCAC GGGGCAGGAC
GGCGTCGACG TCCACACGGT CAGCCGGCCC GGCGTGCCGC TCGGTCGGCC CGCGGACCCG
CGCGAGGTCG CCGCCGTCGT CGCGTTCCTG TGCAGCCCCG CCGCGTCCTA CGTGACGGGC
ACGTCGTACG TCGTCGACGG CGGGATGCTG CAGATGGGGA CGATCGCCGG GTCCGACCTC
AAGGACGACT CCTGGCGGCG CCCACGCCCG CGGCGGTAG
 
Protein sequence
MSEQVRQVAV VTGSESGIGR ACAIALAEAG FDVGLLWFAS GEGRSVETTA ELARAAGARV 
ATQRLDVRDA DSVDPALDAL VGELGRLDAL VNVAGVGGRA AFVDLSLELL RQVAAVDLEG
PFLLAQGAAR RMIAAGRGGR IVSITSVHEH LPRIGTAAYS TAKAGLGMMM RAAALELAEH
GITVNAVAPG EVATPLTGQD GVDVHTVSRP GVPLGRPADP REVAAVVAFL CSPAASYVTG
TSYVVDGGML QMGTIAGSDL KDDSWRRPRP RR