Gene Bcav_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3946 
Symbol 
ID7858009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4365764 
End bp4366477 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content74% 
IMG OID643868049 
Producthypothetical protein 
Protein accessionYP_002883949 
Protein GI229822423 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.125264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTACG CCCCGCCCGC CACGCGCCGC CGATCCACGG GCTGGCTCGC CGTCGTCCTC 
GTGGTCCTGC TCCTGGCGGC CGCCGCCGTC GCCGTCGACC GCTGGTTCGT GACCGAGACG
GAGCGCCGCG TGGCCACCGA GCTCGAGCCC AGCATCGGCG CCCGCCCGGA CGTCAGCATC
GGCGGGTTCC CGTTCCTCAC GCAGTACGCC GCGGGCGAGC TCGACGACGT CCGGATCACC
GCTGACACCG TCACCTACAC CGACCTCACG CTGACGGACG TGACGTTCGA CGCGGCCGGG
GTCCCGACCG ACCTCACCCA GCCGGTCGGC CAGGTGCGGG TGGACGCCGT CGTCCCGGCC
GACACGCTCA CCGCCGCGCT GCAGAACGCG GAGGGCGTGC CCGACGGCGT CACGATCGTG
ACGCAGGACG GTGCGGTCGT CGCGTCGGTC AGCGTGCTCG GGCTCCCGAT CGAGGCGACT
CTCGCGCCGC GCCCGGACGG ACGCGCGATC GCCGTCGACG TGGAGGAGGT CACGATCGGC
GGCGCCGTCG TCTCCGTCGT CGACCTTCCG GCATTCGTCG CCGACGCGCT CACGGGCCTG
CGCGTCGAGC TCGACCAGCT GCCCGAGGGC CTCGAGCTGA CGACGTGCGA GGTGACGGAC
GACGGCGTCC GGCTGGTCGC GGAGGGCACC GACGTCGTCC TGCCGACCGG CTGA
 
Protein sequence
MTYAPPATRR RSTGWLAVVL VVLLLAAAAV AVDRWFVTET ERRVATELEP SIGARPDVSI 
GGFPFLTQYA AGELDDVRIT ADTVTYTDLT LTDVTFDAAG VPTDLTQPVG QVRVDAVVPA
DTLTAALQNA EGVPDGVTIV TQDGAVVASV SVLGLPIEAT LAPRPDGRAI AVDVEEVTIG
GAVVSVVDLP AFVADALTGL RVELDQLPEG LELTTCEVTD DGVRLVAEGT DVVLPTG