| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3937 |
|---|
| Symbol | |
|---|
| ID | 7858000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 4356874 |
|---|
| End bp | 4357677 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643868040 |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_002883940 |
|---|
| Protein GI | 229822414 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.793317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAAGC AGTCCGCCCG CGAGACCGTG CAGGGCACCC AGAGCATCGA TCGTGCCCTG
TCGCTGCTCA CGGCGTTCTC CGCGGAGCGC CCCCGCCAGC GCATCTCCGA CCTCGTGTCC
ACGACCGGCC TCGGGCAGTC GACGGTGTCC CGGATGGTCG CCGCCATGAC GAGCATGGGC
TTCATCCGGC ACGACCCGCT CAGCGGCCTC TACTCGCTCG GGCCGGAGGT CGTGGACCTC
GCGGGGATCG TCCTCAACGA CCACCCGGTG CACGCCGCCG CGCGCCAGAT CGCGCAGAAC
CTCGCCGCCT CGCTCGGCCT CGGTGTGAAC GTGGCGGAGC GCTCCGGCCA GCACCTGTTC
TACCTGTGCA ACTTCGAGGG CAAGGACGCC CCGCGCAACT CGACGCTCAT CGGTCGCGGC
GGCCCGCTGC ACGCGACGGC CCTCGGCAAG GCGCTGCTCA TCGACTCGGA CCGCGCGAGC
CTCGAGTCGC TGCTCGGCGC GACGTTCGAC AGGTACACCG CCCGCACGAT CACGACCGTG
GACGCGCTCC ACCAGGAGAT GGCCGCCGTC GCCGACCGCG GCTACGCGAT CGAGAACGAG
GAGCTCGCCC TGCGGCGCGC CTGCCTGGCG GCGCCGATCC GCGGCCGCGG GGGCGACGTG
GTCGCCGCCG TCTCCGTGTC CGGCCCGCTG TCCGCGATGA ACCTCGCCGA GCGCGAGGAC
TTCCTCGCCA TGGTGCTCAT CGAGCAGGCG GACCAGATCT CGACGGCGCT CGGGTACGTC
GCGCGAGCGG CGACGACGGC GTAG
|
|---|
| Protein sequence | MPKQSARETV QGTQSIDRAL SLLTAFSAER PRQRISDLVS TTGLGQSTVS RMVAAMTSMG
FIRHDPLSGL YSLGPEVVDL AGIVLNDHPV HAAARQIAQN LAASLGLGVN VAERSGQHLF
YLCNFEGKDA PRNSTLIGRG GPLHATALGK ALLIDSDRAS LESLLGATFD RYTARTITTV
DALHQEMAAV ADRGYAIENE ELALRRACLA APIRGRGGDV VAAVSVSGPL SAMNLAERED
FLAMVLIEQA DQISTALGYV ARAATTA
|
|---|
| |