Gene Bcav_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3930 
Symbol 
ID7859053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4347697 
End bp4349619 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content73% 
IMG OID643868033 
Productprotein of unknown function DUF1680 
Protein accessionYP_002883933 
Protein GI229822407 
COG category[S] Function unknown 
COG ID[COG3533] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.693712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACA CGCTGAACCC GACCACCACC CGCCGCCACC CCGTGAACGT GCGGGACGTC 
GTCGTCGAGG ACGCCTTCTG GGGACCGCGC CAGCAGCAGC TGCGCGCCAC GACGCTGGAC
GCGCAGTACG ACCAGCTCGT CGCGACGGGC CGGATCGGCT CGCTCGCGCT CACCTGGACG
CCCGGTTCGG ACGAGCCGCG GCCCCACCCG TTCTGGGAGA GCGACATCGC CAAGTGGCTC
GAGGCGGCGA GCTACGTGCT CGGCACGCAT CCCGACGCCG CGCTCGAGGC CAAGGTGGAC
GGCGTCGTCG CCGCTCTGGC CGGTGCCCAG CAGGAGGACG GGTACCTCAA TGCGTACTTC
ACAGTGGTGG CGCCGGGGGA GCGGTTCACC GACCTGCGCG ACGCGCACGA GCTGTACGCC
GCCGGGCACC TCATCGAGGC CGGCGTCGCG CACCACGAGT CGACGGGGAA GACCACGCTG
CTCGACGTCG TGGCGCGGTA CGCCGACCTG CTCGTGAGCG AGTTCGGCCC CGGCGGCGCC
CACGAGGGTG GCTACTGCGG CCACGAGGAG GTGGAGCTCG CCCTCGTGCG GCTCTACCGG
ACCACGGGCG AGCGCCGCTA CCTCGACCTC GCGCTCGCGT TCGTCGACGC GCGCGGCACG
ACGCCGCACT ACTTCGACGT CGAGCAGGAG CAGCGGGGGA CCGCCGGGTT CTTCGGCGCG
ATGTTCCCGC AGCGCGGCGA CCGGCGGCAG GAGTTCCTGG AGTACAACCA GTCGCACGCC
CCGGTGCGCG AGCAGAGCCA GGCCGTCGGG CACGCCGTCC GGGCGATGTA CCTGTACTCG
GCGATGGCCG ATCTCGCGGC CGAGACCGGC GACGAGGGGC TGCGCGGCGC GTGCGAGACG
CTGTGGACGC ACCTGACCAC GAAGCGCATG TACGTCACGG GCGGCATCGG CGACTCGCGG
CACAACGAGG GGTTCACGCG GGACTACGTG CTCCCGAACG ACTGTGCGTA CGCGGAGACC
TGCGCGGCGA TCGGGCTCGT GTTCTGGGCT CGGCGCATGG CCTCGCTGTC CGGCAGTGCG
CAGTACGTGG ACGTGCTGGA GCGGGCGCTC TACAACGGCG TCATCGCCGG CGTGAGCGCC
GACGGTCAGA AGTTCTTCTA CGAGAACCCG CTCGCCAGCG ACGGCTCGGC TGTCCGGCGG
GACTGGTTCG ACTGCGCGTG CTGCCCGCCC AACCTGGCGC GCCTCGAGGC GTCGCTCGGG
TCCTATGTCT ACGCGGCCAG CGCCGACTCG CTCGCCGTCG ACCTCTACGT CGGCTCCACC
GTGGCACGCC GCCTCGGTGG CGCGGACGTG CGGTTGCGGC AGTCGAGTTC GTCCCCGGCA
GGGGGAGACG TCGCGCTGAC CGTGTCGAGC TCGGCGCCGG CCGTGTGGTC GCTGCTGCTG
CGCGCGCCGT CGTGGGCCCG CGGGACGGCC GTCAGCGTCA ACGGCGAGGC GACGGACGCC
GTCGTGGGGG AGGACGGGTA CGTGACCCTG CGCCGCGAGT GGGCCGACGG CGACAGGGTC
GACGTCGCGT TCGACGTCGA GGTCCGGCGC CTGTACGCCA GCACCCATGT CGCCGCCGAC
GCCGGCCGCA CCGCGCTCGC CTACGGCCCG TTCGTGTACT GCGTCGAGGG TGTCGACGTC
GAGGCCCCCG TGCACGCCGT GGTCCTCGGC GACTCCGCGC TCGAACCCGT GCTGCCGGCG
TCGGAGGTCG TGCCCGTGCT CGTCGGGCCG GCGTCCGTCG AGACCCGCGG CAGCGCGGAC
GACGCAGTGC TCTACTCGGA GGCCCGCGCC CCGCGCCGCG ACGTCGAGCT CACGGCCGTG
CCGTACTACT CGTGGAACAA CCGCGGGGCC TCGACGATGG CGGTCTGGCT CCGGGAGGGC
TGA
 
Protein sequence
MTHTLNPTTT RRHPVNVRDV VVEDAFWGPR QQQLRATTLD AQYDQLVATG RIGSLALTWT 
PGSDEPRPHP FWESDIAKWL EAASYVLGTH PDAALEAKVD GVVAALAGAQ QEDGYLNAYF
TVVAPGERFT DLRDAHELYA AGHLIEAGVA HHESTGKTTL LDVVARYADL LVSEFGPGGA
HEGGYCGHEE VELALVRLYR TTGERRYLDL ALAFVDARGT TPHYFDVEQE QRGTAGFFGA
MFPQRGDRRQ EFLEYNQSHA PVREQSQAVG HAVRAMYLYS AMADLAAETG DEGLRGACET
LWTHLTTKRM YVTGGIGDSR HNEGFTRDYV LPNDCAYAET CAAIGLVFWA RRMASLSGSA
QYVDVLERAL YNGVIAGVSA DGQKFFYENP LASDGSAVRR DWFDCACCPP NLARLEASLG
SYVYAASADS LAVDLYVGST VARRLGGADV RLRQSSSSPA GGDVALTVSS SAPAVWSLLL
RAPSWARGTA VSVNGEATDA VVGEDGYVTL RREWADGDRV DVAFDVEVRR LYASTHVAAD
AGRTALAYGP FVYCVEGVDV EAPVHAVVLG DSALEPVLPA SEVVPVLVGP ASVETRGSAD
DAVLYSEARA PRRDVELTAV PYYSWNNRGA STMAVWLREG