Gene Bcav_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3925 
Symbol 
ID7858738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4344669 
End bp4345439 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID643868028 
Productprotein of unknown function DUF161 
Protein accessionYP_002883928 
Protein GI229822402 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCAG CGCGCACCGG TCCAGTGTGG CTGAAGTGGC TATCGATAAC CAGGCCAATC 
GCGCCTCAGA CTAGGGCCGT GACGACAGAG GCCCGCGCCG ACCCCCACCC CGCTCCCGGC
TCGAGGGCCG CGACGCTCGG CCCCATCGAC CAGCTGCGAG CCGGACGTCT CGGACGCCGC
CTGACACAGC TCGTCGCCGG GCTCCTCCTG TACGGCTTCT CGATGGCGAT GCTCGTGGAG
TCCGGCCTCG GCCTCGACCC GTGGGACGTC CTCCACGAGG GCATCGCCCT GCGCATCCCG
CTGACGTTCG GCCAGGTGAC GATCGCCGTC GGCGTCCTCG TGCTGCTCGC CTGGATCCCT
CTTCGGCAGA AGCCCGGCAT CGGGACGGTG CTCAATGTGA TCCTCATCGG GCTCGCGGCC
GACGCGGGGA TCGCGCTGCT CCCGCGGCCC GACGCGCTCG GCGGGCAGGT CGCCCTGCTG
GTCGGCGGGA TCGTGCTCAA CGGGCTCGCC GGGGCGCTCT ACGTCGGGAC CCATCTCGGG
ACGGGACCGC GCGACGGGCT GTGGGTCGGG CTCGCGCGCC GCACCGGGCG CAGCCAGCGG
CTCGTCCGGA CGGTCATCGA GGTCTCCGTG CTCGCCGTCG GGTTCGCGCT CGGCGGCACG
GTCGGCGTCG GCACGGTGCT GTACGCCGTC TCCATCGGGC CGCTCGTCCA GCTCTTCATG
CCGTGGGTCG CGGTACGGCT ACGTTCTGAC GATGGAGTCC ACGAGCACTG A
 
Protein sequence
MAPARTGPVW LKWLSITRPI APQTRAVTTE ARADPHPAPG SRAATLGPID QLRAGRLGRR 
LTQLVAGLLL YGFSMAMLVE SGLGLDPWDV LHEGIALRIP LTFGQVTIAV GVLVLLAWIP
LRQKPGIGTV LNVILIGLAA DAGIALLPRP DALGGQVALL VGGIVLNGLA GALYVGTHLG
TGPRDGLWVG LARRTGRSQR LVRTVIEVSV LAVGFALGGT VGVGTVLYAV SIGPLVQLFM
PWVAVRLRSD DGVHEH