Gene Bcav_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3922 
Symbol 
ID7858735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4341372 
End bp4342628 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content70% 
IMG OID643868025 
Productoxidoreductase domain protein 
Protein accessionYP_002883925 
Protein GI229822399 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTTC TTCCCCCGGA GCCGACGGCT CCCCTCGACC CGGGCGCCGG GTCGTTCTCG 
ATCGGCATCG TCGGCGCCGG GCAGTTCGCC GGCAGCTTCG CGACGCTGTG GAACCTGCAC
CCGAACGTGT CGCGTCTCGC CGTCACGGAC GTGATCCCGG AGCGCGCCAA GGAGCTCGCG
GCGCGGTTCG AGGGCGCCAC CGTCGTGGAC TCGTACGAGG AGATGCTCTC CTCCGACGTC
GACGCCGTCG CGATCCTCAC GCAGCGCTGG ACGCACGGGC CGCTCGTGGT GCAGGCGCTG
GAGGCCGGCA AGCACGTGTA CTCGGCCGTG CCGATGGCCG TCGATCTCAC GGAGATCGAG
CGGATCATCG AGCTGGTCAC CGAGACCGGC CTCACCTACA TGATGGGCGA GACGAGCTAC
TACAACCCGG CCACGGTGTA CGTGCGGGAC CGGAACCGCC GGGGCGAGCT CGGCCGCGTG
TTCTACTCCG AGGGCGACTA CGTCCACGAC ATGGACCACG GGTTCTACGC CGCCTACCAG
TACTCGGGCG GCGAGAACTG GAAGTCGACG GCGAGCTACC CGCCGATGCT CTACCCGACG
CACGCGATCG GCGGCGTGCT CGGCGCGATC CCGACGTACG CGACCTCCGT GTCGTGCATC
GGCATCGAGG ACGACCGCGG CGACGGCGTC TTCGACCGCG ACGTGTCGAT GTTCGACAAC
TCGTTCTCGA ACATGTCGGC GCTGTTCGAG CTCGCCGACG GCGGAGTCAT GCGTACCAAC
GAGTTCCGGC GGGTCGGCCA CTACGGCGGC GTGCACGAGT CCCGGTTCCG GTTCTACGGC
ACCGACCTCG TCATGGAGCA GGGGTCCAAG GGGGCGCACT ACACGTCGCG CGCCGACGGC
GAGTACCACG ACATCTCCGA CCTCTTCCAC ACCAACGAGG TCCAGCTGTC GGCCGACTCC
GTGACGGAGG GGCTCGACCC GGCGTTGCTG GAGAGCTTCA CGTCCGGCAG CGCCCGGGTG
CACGACCGGT CCCGGCTGCC GCGCACGTAC GACGGCGCCC CGAACGGGCA CGAGGGCTCG
CACCACTACC TCGCGGACGA CTTCGTGCGG TCCGTCGTCA CGGGCACGGT GCCGCCGGTG
AACGCGTGGC TGTCCGCGCG GTTCACTGCT CCGGGCATCG TGGCGTACCA GTCCGCACTC
GCGGGCGGCG AGCGGCTCGA CGTCCCGGAC TTCGGGGAGC CGCCGGCCTC CGCCTGA
 
Protein sequence
MSLLPPEPTA PLDPGAGSFS IGIVGAGQFA GSFATLWNLH PNVSRLAVTD VIPERAKELA 
ARFEGATVVD SYEEMLSSDV DAVAILTQRW THGPLVVQAL EAGKHVYSAV PMAVDLTEIE
RIIELVTETG LTYMMGETSY YNPATVYVRD RNRRGELGRV FYSEGDYVHD MDHGFYAAYQ
YSGGENWKST ASYPPMLYPT HAIGGVLGAI PTYATSVSCI GIEDDRGDGV FDRDVSMFDN
SFSNMSALFE LADGGVMRTN EFRRVGHYGG VHESRFRFYG TDLVMEQGSK GAHYTSRADG
EYHDISDLFH TNEVQLSADS VTEGLDPALL ESFTSGSARV HDRSRLPRTY DGAPNGHEGS
HHYLADDFVR SVVTGTVPPV NAWLSARFTA PGIVAYQSAL AGGERLDVPD FGEPPASA