Gene Bcav_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3916 
Symbol 
ID7858729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4336271 
End bp4338298 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content74% 
IMG OID643868019 
Producthypothetical protein 
Protein accessionYP_002883919 
Protein GI229822393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA CCGCCGCACC GGACGTGCTG GCCCACGTCG TCGTGCGGCT GTCGCAGATT 
GCGATCGCCG CGCAGGTGCA GCGTCCCGTC GTCACGACGT GGCGACGACG TTTCGCCGGC
ACGGCGACAC CCTTCCCGGA CCCCGTGCCG GGCACCGATC TGGAGTTCCG CGCGTCCGAC
GTCGCCGACT GGCTCGAAAC CACCGCACAC GGGAACAACC CGGACGTCCG CCGCGACCTC
GCCCTGCACG GCCAGCTCAC CATCGACGGC GTCGCGGACG AGGCGCTCGC CGCGGCTGTC
GAGGCGCTGC TCGCCGTGAA GGCGCGAACG GGGGAGACTC TCGCGGCGCT CACGCGGCTC
GAGCTTCTGG ACCTGGCCGA CGACGTCGAC CCCGACGACG CCTGCTGCTT CAGCGAGATC
GAGGCGCTCG GGTCCGCGGG GGTCGCGGCC GCGTTCGTCG ACATCCTCGC CGATGCGGCG
TTCGACGCGC CGACGGCGCT GGAGACGATC CTGGGCAGAT CCCCCGCCGC GGCGCCGCCT
GCCGACGCGG TGGTCGACGT CGTCGCCCGC CTCGCTCTCG CCCTCGCCGG ATGGGAGCCG
GGCTCATCCG TCGAGCTCGC CGACCCGCAT CCGCGTGACG GCCATCTCCT CGCCCGCGTG
CAGCACGTGG TCGGCGATCT GGAGGAACCG CGGGCGTGGC TCGGGCCAGC GCTCGACTCC
ATCGCCGAGC GCCGGCTGCG GCGCCGCCTG CTGGCGCAGG GCTGGCGGCT CGCCGCGGCG
GACGACGACG CCACGCCGGC GCAGGCGATC ATCGTCACGG ATCTCACCGG TGCGGGCAGC
GACGAGGAGA TCCTCCGGCG TGCCGACGAC GTCGCCCTGT CGCTCCATCC CGGCCAGCGC
GCCGTGCTGG TTGCGCGCGC CTCGGCGTTC GTGGACGCTC CCAGCTCACG TCATGCGGAG
CTGCGCCGCG CCGACCTGCT GCGCACGGAC CGCATCCGCA CCGTGATCCG GCTTTCCGCC
GGCCTCGTGC CGTCGCGGGC CCGTGAGCAT CTGGCGATCT GGGTGCTGGC AGACCCGGAG
GACGGCACGC CGCCAGCTGA GCGATGGACC ACCGTCGCCG ACGTGAGCCA CGTGGAGGCG
ACGCCTGCGA CGCTGGGTTC CGCCGTCGTC GGCGATCTCC TGACCGACGT GCTCGCCGCG
GTCGCGGGGC GGGACGCCGT CCACCGGCAC ACGTTTCGCT TCGCGCAATT CGTGCAGACT
CGCTTCCTCT TGGCGCAGTC CGGCGACCTG GTGCTCGCGG CGCGACCACC CGTACGGGGC
GGGACCAGGG CGTCAACCGA CCCGGCCGCA GTGGCCGCCC AGCTCGTGCG CGAGACCGCG
TCCCCGGAGG AGAAGCAGCT CGCGGTGGGC ATCGGTTCCG GAGTCGGGGA AGCGTCGAGC
AGGGCGCGGC TGGGGAGTCT CGTGAGCTCG GGACTCGCGA GGGTGGTGCC CGGCAATCGC
GTGCCCGACG ACGTCGCGTC CTCCGACGCG GACGGGTACC GCCTGATCGG GGCGGCCGAG
CTGGCCGACG ACGCCGCGCC GCGCCGCGCC GTCGACCGCC TCGCCTTGGA GCGCGACCAC
CCAGGGGTGC GTCTGACGGA ACCCGGCGAC GTCGTCTTCA CGACGAGCCC GCGCCCGATG
GCGCTCGTGG ACTACGAGGG CCTGTCCGTC GTCTGCGCAC CGTCGCGCGT GCTGCGCCTG
TCCGGCGAGA CGGCCGGCCT TCTGCCCGAG GTGATCGCCG GTGTGATCCG CGCCTTGCCC
GCCGGGGCCA AGCGCTGGCG CATGTGGGAC GTCCCGCTCG TGCCCGCCGA TCAGGCTGCG
CCGCTGACGG CCGCACTGGC GGCGGTGCGT ACTCGTCGCG AGACGACGCG TGCCCGCCTC
GCCACGCTCG ACGCCCTCGA GGCGGCGCTC CTGACCGGCG TGTCGGACGG CGCCGTCATG
CTGACGCCAG ACGAGGCCGC CGACGACGCC GTCAGTCCCG TTCCGTAG
 
Protein sequence
MTTTAAPDVL AHVVVRLSQI AIAAQVQRPV VTTWRRRFAG TATPFPDPVP GTDLEFRASD 
VADWLETTAH GNNPDVRRDL ALHGQLTIDG VADEALAAAV EALLAVKART GETLAALTRL
ELLDLADDVD PDDACCFSEI EALGSAGVAA AFVDILADAA FDAPTALETI LGRSPAAAPP
ADAVVDVVAR LALALAGWEP GSSVELADPH PRDGHLLARV QHVVGDLEEP RAWLGPALDS
IAERRLRRRL LAQGWRLAAA DDDATPAQAI IVTDLTGAGS DEEILRRADD VALSLHPGQR
AVLVARASAF VDAPSSRHAE LRRADLLRTD RIRTVIRLSA GLVPSRAREH LAIWVLADPE
DGTPPAERWT TVADVSHVEA TPATLGSAVV GDLLTDVLAA VAGRDAVHRH TFRFAQFVQT
RFLLAQSGDL VLAARPPVRG GTRASTDPAA VAAQLVRETA SPEEKQLAVG IGSGVGEASS
RARLGSLVSS GLARVVPGNR VPDDVASSDA DGYRLIGAAE LADDAAPRRA VDRLALERDH
PGVRLTEPGD VVFTTSPRPM ALVDYEGLSV VCAPSRVLRL SGETAGLLPE VIAGVIRALP
AGAKRWRMWD VPLVPADQAA PLTAALAAVR TRRETTRARL ATLDALEAAL LTGVSDGAVM
LTPDEAADDA VSPVP