| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3906 |
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| Symbol | |
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| ID | 7858719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 4325841 |
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| End bp | 4329134 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643868010 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_002883910 |
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| Protein GI | 229822384 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCGA GCGAAGCCGA CTGGGAGCAG TTCGCCCTCG AGGAGCTCGC CGAGCACGGC
TGGACACCTC GGGAGGGCAA GTCCATCGCC CCCGGCGCAC CCGCGGTCGT GGACGACGAG
GGCCTCGCGA TCGCCGAGCG GGAGACCTGG GCCGACCTTC TCATCCCGTC TCGGCTCAAG
CGGGCGGCGC GGAAGGTCAA CCCCGACGTG CCCCCGGCGT ACCTCGACCA GGCCCTCGCC
ACCCTGACGA CTCCGCAGTC GCAGGACGCG ATCGCCGAGA ACAAGCGGCT CCACGACGCC
GTCGTCGAGG GATTCCGCTT CACCTACCTC GACGACGACG GCCAGGAACG CACCCCCACC
ATCAGGCTCG TCGACGCCGA CCCCGACCGC AACGAGTGGC TCGCCGTCAA CCAGGTGACA
GTGGTGAGCG GTGACGTCGA GCGCCGGTTC GACGTCGTCC TCTACCTCAA CGGGATGCCC
GTCGGGATCA TCGAGCTCAA GAACGCCGGC ACCCCTCACG CCGACGTCGC AGCGGCGCAC
GCCCAGCTCA CCACCTACGT GCGAGAGCTG CCGCTGGCGT TCCGGTTCGC CGTCCTCACC
GTCGCGAGCG ACGGCGTCAC GGCGAAGTAC GGCACCCCGT TCACGCCGCT CAACCACTAC
TCGCCGTGGA ATGTGGACGA CGACGGACGC GTCGTGGGCC GTTCGACGGC GCCGGGTCCG
GAGGACAGCC GGGCGACGGA CGGCATCACC GCCGACATCC CCGAGGGCGA CGCCGCGACG
GGCGACGCCG GTGCACTGGC ACTCGAAGTC CTCATCGCGG GCCTGTTCAA CACCGAGCGC
TTCCTGCAGC TGCTGCGGGG ATACGTCGCG TTCGACTCCG GCGACGGCGG CCTCTCCAAG
CGCATCGCGA AGCCGCACCA GTACTTCGCC GTCTCGCAGG CGATCGCCAC GACCATCCAC
GCGGTCGAGA CGAACGGCAA GGCCGGCGTC GTCTGGCACA CGCAGGGGTC CGGCAAGTCC
ATGGAGATGG AGCTGTACGC CAACCAGGTG ATGCGGCACC CGAAGCTGCA CAACCCGACG
ATCGTCGTCG TCACTGACCG CACGGAGCTC GACGGCCAGC TCTACGAGAC CTTCAACCGC
AGCGAGCTGC TGCCGGAGAA GCCCCGGCAG ATCGTGCGTC GCAACGAGCT GCGCGACGAG
CTCGGCTCCC GGGTGACCGG CGGGATCTAC TTCACCACCC TGCAGAAGTT CGGGCTCTCC
AAGGAGGAGA AAGACGCCGG GCTCGCGCAC CCGCGGCTCT CGGACCGGCC CAACATCGTG
GTCATCGTGG ACGAGGCGCA CCGCAGCCAC TACGACGACC TCGACGGCTA CGCGTGGCAC
CTCAAGAACG CCCTCCCGAA CGCGACGCTC ATCGCGTTCA CGGGTACGCC GATCTCGTTC
GCCGACCGCA ACACACGCGA GGTGTTCGGC GACGTCATCC ACACGTACGA CCTCACGCGG
GCCGTCGAGG ACGGTGCCAC GGTGCCCGTG TACTTCGAGT CCCGCCTCGT CAAGGTGGGC
TTCAGCGGAG ATCTCACGGA CGACCAGATC AACGCATCGG CGGACGAGGT CACTGTGGGA
CTCGACGAGA CGGAGCGGGA CCGGATCGAG AAGTCTGTCG CCGTCGTCAA CGCGATCTAC
GGCGCACCCG CGCGGTTGGA GAAGCTAGCG ACCGATCTCG TGGCGCACTG GGAAGCGCGT
CGGACGGCGA TGGCGGAGCT CGTACGCAGC GTCGACGTCG ACGGCGGGGA CGTGGCTCCC
GGCAAGGCTC TGGTCGTGTG CGCCACTCGT GACATCGCCG CCCGGCTCTA CGAGCAGATC
GTCGCCATCC GCCCCGGCTG GCACTCGGCG GACATTCATG CCGGGAAGGT CAAGGTCGTC
TACTCCGGTT CGGCCACGGA CCAGCCACCT ATCTCGGACC ACGTGCGCCG CGACTCCGAG
AACGCCGTGA TCAAGAAGCG GCTCAAGGAC CCGACCGACG AGCTCGAGAT CGTGATCGTC
AAGGACATGA TGCTCACGGG GTACGACTCG CCACCGCTTC ACACGCTGTA CCTGGACCGC
CCGATCCGCG GAGCCTTGCT GATGCAGACC CTCGCCCGGG TGAATCGCAC GTTCCGCGGC
AAGAACGCCG GTCTGCTCGT GGCGTACGCG CCGATCGCGG AGCACCTGAC GGCCGCACTG
GCGGAGTACA CGGATCGCGA TCAGGAGGCC AAGCCGGTCG GCAAGACGGT GGACGACGCC
GTCGACGTCG CCCGCCAGCT GATCGAGGAA CTGCGCGCCG TGCTCGTTGG GTTCGACTGG
CGCGCCGACC TGCGACGCCG TCAGTCCTCG GGTGACAAGG CCGCAGGGCT CCGGACGATC
CTGGCCGCGG TCAACTGGCT GCGCACACCG CGCCGAGGCG ACGACGCCAC GGACGGCGTG
ACGCCGTCGT CCACCTTCCG CACGCTCGCG GGTCAGCTGG GACGCGCCCG CGCGATCAGC
GGGCCGGAGG CTCTCGCCGA CGTCGATAAC GAGATCCGCT TCTACGAGGA GGTGCGGATC
TGGATCGGGA AGCTGGACGC CGAGGAGCGG CAGGCTCGCG GGGAACCGAT CCCCGACGAC
GTCCAACGGA TGCTGAACGA GCTCATGGCG GCAGCAGTGG AGTCGGGCGA GGTGCTCGAC
ATCTACGGTG CCGCGGGGCT GGAGGCGCCG CGCCTGGACC GCCTCGATAC CGACTACCTC
ACGCGCGCCC AGTCCGCCGA GAACCCACAG CTCACGATCG AAGCACTGCA GAACCTGATC
GCTCGCGAGT CTCAGACCGT GACCCACGGC AACCTCGTGC GCCAGCGTGT GTTCTCCGTC
CGGCTGAGCG AGGTGATGGC GAAGTACACG AACTCGAACC TCACGTCGGC GGAGGTGATC
GCGGCGCTCA TCGAGGTGGC ACGCGACGTG TCCGCCGAGG GTGATCGGGG CGCGTCGTTC
GACCCGCCGC TCTCGACCGA CGAGCTCGCC TTCTACGACG CGGTCGCCTC GAACTCCTCG
GCGGTCGAAG TCCAGGGGAC GGGCGTACTT GCCGAGATCG CGCGCGAGCT GGTGGCCGTG
GTGCGGCGCG ACGCCAAGAC GGACTGGACC GTCCGTGATG ACGTGCGCGC CAAGCTGCGG
TCCTCGATCC GGCGCCTGCT CGTCAAGCAC GGCTACCCGC CGGACCAGCA GCCCGAAGCC
ATCAAGCTCG TGATCGAGCA GATGGAGGCG ATGGCGCCGC GCCTCGCGGC GTGA
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| Protein sequence | MHPSEADWEQ FALEELAEHG WTPREGKSIA PGAPAVVDDE GLAIAERETW ADLLIPSRLK
RAARKVNPDV PPAYLDQALA TLTTPQSQDA IAENKRLHDA VVEGFRFTYL DDDGQERTPT
IRLVDADPDR NEWLAVNQVT VVSGDVERRF DVVLYLNGMP VGIIELKNAG TPHADVAAAH
AQLTTYVREL PLAFRFAVLT VASDGVTAKY GTPFTPLNHY SPWNVDDDGR VVGRSTAPGP
EDSRATDGIT ADIPEGDAAT GDAGALALEV LIAGLFNTER FLQLLRGYVA FDSGDGGLSK
RIAKPHQYFA VSQAIATTIH AVETNGKAGV VWHTQGSGKS MEMELYANQV MRHPKLHNPT
IVVVTDRTEL DGQLYETFNR SELLPEKPRQ IVRRNELRDE LGSRVTGGIY FTTLQKFGLS
KEEKDAGLAH PRLSDRPNIV VIVDEAHRSH YDDLDGYAWH LKNALPNATL IAFTGTPISF
ADRNTREVFG DVIHTYDLTR AVEDGATVPV YFESRLVKVG FSGDLTDDQI NASADEVTVG
LDETERDRIE KSVAVVNAIY GAPARLEKLA TDLVAHWEAR RTAMAELVRS VDVDGGDVAP
GKALVVCATR DIAARLYEQI VAIRPGWHSA DIHAGKVKVV YSGSATDQPP ISDHVRRDSE
NAVIKKRLKD PTDELEIVIV KDMMLTGYDS PPLHTLYLDR PIRGALLMQT LARVNRTFRG
KNAGLLVAYA PIAEHLTAAL AEYTDRDQEA KPVGKTVDDA VDVARQLIEE LRAVLVGFDW
RADLRRRQSS GDKAAGLRTI LAAVNWLRTP RRGDDATDGV TPSSTFRTLA GQLGRARAIS
GPEALADVDN EIRFYEEVRI WIGKLDAEER QARGEPIPDD VQRMLNELMA AAVESGEVLD
IYGAAGLEAP RLDRLDTDYL TRAQSAENPQ LTIEALQNLI ARESQTVTHG NLVRQRVFSV
RLSEVMAKYT NSNLTSAEVI AALIEVARDV SAEGDRGASF DPPLSTDELA FYDAVASNSS
AVEVQGTGVL AEIARELVAV VRRDAKTDWT VRDDVRAKLR SSIRRLLVKH GYPPDQQPEA
IKLVIEQMEA MAPRLAA
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