Gene Bcav_3890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3890 
Symbol 
ID7858703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4310806 
End bp4312092 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content78% 
IMG OID643867994 
Producthistidine kinase 
Protein accessionYP_002883894 
Protein GI229822368 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGAGG CGCTGAACCG CCGGCTCGCC GCCGTCGGCG TCCGCACGCC GACCGGCCGG 
GACGCGCTGC TCGGCGCCGC CCTGGCCGTG GCGACGGTGG CGGCGTTCCT CCTCGTCCTG
CGCATGATCG GCGGCGAGCT CGGCGCATCG TTCGAGCCGG CGGTGGAGCT CGCGACGATC
CCGGCGTGGG CGCGGGTGAC CGCCTGCCTG GTGCTCGCCG CGCAGGCGAT GGCACTGACG
CTGCGCCGTC GGGCACCCCT GCTGTGCCTG TTGCTCACGC TGGTCGGGCA GCTCGCGCTG
GTGCCCCTGC TGCCCCCGCT CGTCTCGTTC CAGGCGCCGG CCGGCCTCGT CGCGGCGTAC
TCGCTCGGCG CGTACTCCCG GCGGCCCGTC GCGCTGTGGG GGGCGGCCGG GGTCGCCGTC
GTCCAGGTGC TGCTCGGTTA CGTGCTCGCG GGGGCGCGGG CGACCGAGGC CGAGGTGTCG
GTCGCGTCGC AGCTGTGGGG TGGCCTCGTC TCCGCGCTGG TGACCTACCT CGGTGCGGCG
CTGGTCGGGG CGTACGTCGG GACCCGGCGA GAGCTCCTGG CGCAGCTGCG GGAGCGCGTG
ACCCACGCCG AGCGGGAGCG CGAGGCGCTC GCCGCCCGGG CGGTGCTCGA GGAGCGGGGG
CGCATCGCCC GCGAGCTGCA CGACGTCGCC GCGCACCACC TGTCCGGGAT CGTCGTGCAG
GCGACGGCGG CCGACCGGCT CCTCGACCGC GAGCCCGAGC GCGTGCGCGA GTCGCTCGCG
TCGATCCGCG CGCAGGGTCG CGAGACGCTG GAGAACCTGC GCGGCGTCGT CGGTCTGCTC
CGCGGCGCCG ACACGGCCGA GGACGCGCCG CAGCCGACCC TGGCCGACGC CGACGAGCTC
CTCGACGTCG CCCGCGACAG CGGGAGCGCC GTCACCGTCG CGACGGCGGG GACCGCGTGG
CCCCTCGGCC CCACCGCGGA GCTGACGGTG TACCGGGTGC TGCAGGAGTC GCTGTCGAAC
GTCCGCCGGC ACGCGCCCGG TGCGGCGATC GACGTCCGGC ACTCCTACAC CGCCGACGCG
TACGTCGTCA CGGTGCGCAA CGCGCTCTCG CTGCGGGGGA CGACGGCGTC CGTGGAGTCG
GGCGGACGCG GCCTCGTGGG CATGGCGGAG CGCGCGGCGC TGGTCGGAGG CGACCTCGAG
GCCGGGGCCG GCCGCGACGG CGCGTGGACG GTGCGGCTCA CCGTGCCGCG GGCCGGCACC
CGCACCGTGC CGGGGGTGGC GCCGTGA
 
Protein sequence
MLEALNRRLA AVGVRTPTGR DALLGAALAV ATVAAFLLVL RMIGGELGAS FEPAVELATI 
PAWARVTACL VLAAQAMALT LRRRAPLLCL LLTLVGQLAL VPLLPPLVSF QAPAGLVAAY
SLGAYSRRPV ALWGAAGVAV VQVLLGYVLA GARATEAEVS VASQLWGGLV SALVTYLGAA
LVGAYVGTRR ELLAQLRERV THAEREREAL AARAVLEERG RIARELHDVA AHHLSGIVVQ
ATAADRLLDR EPERVRESLA SIRAQGRETL ENLRGVVGLL RGADTAEDAP QPTLADADEL
LDVARDSGSA VTVATAGTAW PLGPTAELTV YRVLQESLSN VRRHAPGAAI DVRHSYTADA
YVVTVRNALS LRGTTASVES GGRGLVGMAE RAALVGGDLE AGAGRDGAWT VRLTVPRAGT
RTVPGVAP