Gene Bcav_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3883 
Symbol 
ID7858696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4300253 
End bp4301218 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content71% 
IMG OID643867987 
ProductABC transporter related 
Protein accessionYP_002883887 
Protein GI229822361 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.837023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.151879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCATA CCGAAGGACT CACGAAGACC TTCACGCGCG GCAAGGAGAC CGTCGAGGCG 
GTCAAGGGGG TCGACGTCGA CGTGGCCGAG GGCGAGCTGG TCGCCTTCCT CGGCCCGAAC
GGCGCCGGCA AGTCCACCAC GCTCCGGATG CTCACCGGGT TGCTCGCCCC CACGGCGGGC
AGCGCACGGG TGGCGGGGGT CGACGTCGTC ACGCGCCCCG CGCACGTGCG GCAGCGCATC
GGCTACATCG GTCAGGGCAA CGGCGCTGGC CACTCCTACC GGGTGCTCGA CGAGCTCGTC
ACCCAGGGCC GCTTCTACGG GATCCCCACG GCGGAGGCAT TGCGTCGCGC CACCGATCTC
ATCGCCTCGA TGCAGCTGGA CGGGCTCGAG AAGCGCACCG TCTCGACGCT CTCCGGCGGC
CAGCGTCGCC GGCTCGACGT CGCCATGGGC CTCATGAACC ACCCGCCGCT GCTGTTCCTC
GACGAGCCGA CCACCGGCAT GGACCCGCAG AGCCGGGCGA ACCTGTGGGA GCACATCCTG
CGGATGCGGG CCGAGTTCGG CATGACCATC GTGCTGACGA CGCACTACCT CGAGGAGGCC
GACCGCATGG CCGAGCGCGT CGTCGTCATC GACCACGGCT CGATCATCGC CGACGCCCGG
CCGGAGGTGC TCCGCCTCGA GCACGCGGCC GACGTCATCA CCCTGCGGTT CGCACCCGAC
GACGTCGGCA CGGCGCGGTC GGCCCTCGGT GCCGACCTGC GGTTCGCCCC GGCGATCGCG
CAGTCCGGCG ACGACGCGCT GCTCCTCACC CTCGACCGCG GAGCCGAGGC GCTCCCCGAC
ATCCTGTACC GGCTCGACGC CGCCGGCGTG CGTCCGGCCT CGGCCACGAT CGCCGAGGCC
ACTCTCGACG ACGTCTTCCT CAATCTCACC GGTCGCAGCC TGCGCGAGGA AGGAGCTGCA
GCATGA
 
Protein sequence
MIHTEGLTKT FTRGKETVEA VKGVDVDVAE GELVAFLGPN GAGKSTTLRM LTGLLAPTAG 
SARVAGVDVV TRPAHVRQRI GYIGQGNGAG HSYRVLDELV TQGRFYGIPT AEALRRATDL
IASMQLDGLE KRTVSTLSGG QRRRLDVAMG LMNHPPLLFL DEPTTGMDPQ SRANLWEHIL
RMRAEFGMTI VLTTHYLEEA DRMAERVVVI DHGSIIADAR PEVLRLEHAA DVITLRFAPD
DVGTARSALG ADLRFAPAIA QSGDDALLLT LDRGAEALPD ILYRLDAAGV RPASATIAEA
TLDDVFLNLT GRSLREEGAA A