Gene Bcav_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3881 
Symbol 
ID7858694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4298550 
End bp4299356 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content73% 
IMG OID643867985 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002883885 
Protein GI229822359 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.138008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGC CGCTCAAGAC CTCGACGGAC CGCACCCGCA CGGCGACGTC GGCGGACGGC 
ACCCGGATCG CGTACGAGCA GACGGGCTCC GGCCCTCCGC TCGTGCTCGT CGAGGCCGCC
GGCCACTATC GCCGCCTCAG CTCGTTCGAC GGCCTCGTCC CGCTCCTCGC GACAGCGTTC
ACCGTCGTCC GGTACGACCG CCGCGGCCGG GGCGAGAGCA CGGACACCCC GCCCTACGCC
GTCGAGCGAG AGGCCGGCGA CCTCGCTGCG GTGATCGCCG CGGTCGGCGC CCCCGCCTTC
GTCCACACGT TCTCCTCCGG AGCGCTCGTC GCCCTCCAGG CCGCGGCAGC CGGCGTCGCG
ATCGCCCGGC TGAGCCTGGC CGAGCCACCC GTCGGCGACG GGTCCGACGC CGTCGAGCAG
CGCCGCTTCA CCGCCGAGCT GGAGCGCCTC GTCGAGGCGA GCGACAACGA CGGCGCCGTG
GAGTTCTTCC TCACCAGCGT CGGCGTGCCT GAGGACATGC TGGCCGGGAT GCGCGGCACC
GAGTCATGGC AGGCGATGGT CGACGTCGCC CCGACGCTCG TCTACGACAG CCTCGCCAGC
CTGGCGACGA CGACCGACCT GCTCGCCGAC ATCCTGATCC CCACTCTGGT CCTCGCGAGC
TCCGGGAGCT CCGCGGACCT CGTCGGGATG GCAGACGACG TCGCCCGTGG CCTCCCGCAC
GGGAACCTCC GCACGGTCGA CGGCGACTGG CACGGCCTGC CTGACGACGC CGTCGCCGAC
GAGCTGCGCT CCTTCTTCCT GACGTAG
 
Protein sequence
MSSPLKTSTD RTRTATSADG TRIAYEQTGS GPPLVLVEAA GHYRRLSSFD GLVPLLATAF 
TVVRYDRRGR GESTDTPPYA VEREAGDLAA VIAAVGAPAF VHTFSSGALV ALQAAAAGVA
IARLSLAEPP VGDGSDAVEQ RRFTAELERL VEASDNDGAV EFFLTSVGVP EDMLAGMRGT
ESWQAMVDVA PTLVYDSLAS LATTTDLLAD ILIPTLVLAS SGSSADLVGM ADDVARGLPH
GNLRTVDGDW HGLPDDAVAD ELRSFFLT